Bacterial Proteins Concept

subject area of

• Bacillus subtilis -derived peptides disrupt quorum sensing and biofilm assembly in multidrug-resistant Staphylococcus aureus  Journal Articles
• Campylobacter jejuni KDO8P Synthase, Its Inhibition by KDO8P Oxime, and Control of the Residence Time of Slow-Binding Inhibition  Journal Articles
• Chlamydophila pneumoniae PknD Exhibits Dual Amino Acid Specificity and Phosphorylates Cpn0712, a Putative Type III Secretion YscD Homolog  Journal Articles
• Helicobacter pyloriPhysiology Predicted from Genomic Comparison of Two Strains  Journal Articles
• Lactobacillus reuteri -produced cyclic dipeptides quench agr -mediated expression of toxic shock syndrome toxin-1 in staphylococci  Journal Articles
• Myxococcus xanthus translesion DNA synthesis protein ImuA is an ATPase enhanced by DNA  Journal Articles
• Pseudomonas aeruginosaLasB protease impairs innate immunity in mice and humans by targeting a lung epithelial cystic fibrosis transmembrane regulator–IL-6–antimicrobial–repair pathway  Journal Articles
• Salmonella enterica Serovar Senftenberg Human Clinical Isolates Lacking SPI-1  Journal Articles
• Salmonella entericaSerovar Typhimurium Exploits Toll-Like Receptor Signaling during the Host-Pathogen Interaction  Journal Articles
• Salmonella -Containing Vacuoles Display Centrifugal Movement Associated with Cell-to-Cell Transfer in Epithelial Cells  Journal Articles
• SalmonellaProduces an O-Antigen Capsule Regulated by AgfD and Important for Environmental Persistence  Journal Articles
• Sinorhizobium meliloti phospholipase C required for lipid remodeling during phosphorus limitation  Journal Articles
• Staphylococcus aureus Fibronectin-Binding Protein Serves as a Substrate for Coagulation Factor XIIIa:  Evidence for Factor XIIIa-Catalyzed Covalent Cross-Linking to Fibronectin and Fibrin  Journal Articles
• The Helicobacter pylori cell shape promoting protein Csd5 interacts with the cell wall, MurF, and the bacterial cytoskeleton  Journal Articles
• Thermobifida fusca cellulases exhibit limited surface diffusion on bacterial micro‐crystalline cellulose  Journal Articles
• pfs-Dependent Regulation of Autoinducer 2 Production inSalmonella entericaSerovar Typhimurium  Journal Articles
• PhoR autokinase activity is controlled by an intermediate in wall teichoic acid metabolism that is sensed by the intracellular PAS domain during the PhoPR‐mediated phosphate limitation response of Bacillus subtilis  Journal Articles
• d -Ala- d -Ala ligases from glycopeptide antibiotic-producing organisms are highly homologous to the enterococcal vancomycin-resistance ligases VanA and VanB  Journal Articles
• l-Hydroxyproline andd-Proline Catabolism in Sinorhizobium meliloti  Journal Articles
• A Catalog of Reference Genomes from the Human Microbiome  Journal Articles
• A Dual Reporter System for Detecting RNA Interactions in Bacterial Cells  Journal Articles
• A Global Analysis of Protein Expression Profiles in Sinorhizobium meliloti: Discovery of New Genes for Nodule Occupancy and Stress Adaptation  Journal Articles
• A Global Metabolic Shift Is Linked to Salmonella Multicellular Development  Journal Articles
• A Highly Specific DNA Aptamer for RNase H2 from Clostridium difficile  Journal Articles
• A Key Regulator of the Glycolytic and Gluconeogenic Central Metabolic Pathways in Sinorhizobium meliloti  Journal Articles
• A Micro-lyse goes a long way  Journal Articles
• A Single Amino Acid Change in the Response Regulator PhoP, Acquired during Yersinia pestis Evolution, Affects PhoP Target Gene Transcription and Polymyxin B Susceptibility  Journal Articles
• A Sinorhizobium meliloti minE mutant has an altered morphology and exhibits defects in legume symbiosis  Journal Articles
• A Small-Molecule Screening Platform for the Discovery of Inhibitors of Undecaprenyl Diphosphate Synthase  Journal Articles
• A Type VI Secretion-Related Pathway in Bacteroidetes Mediates Interbacterial Antagonism  Journal Articles
• A conserved chaperone protein is required for the formation of a noncanonical type VI secretion system spike tip complex.  Journal Articles
• A divergent Pseudomonas aeruginosa palmitoyltransferase essential for cystic fibrosis‐specific lipid A  Journal Articles
• A diverse intrinsic antibiotic resistome from a cave bacterium  Journal Articles
• A genetic screen identifies a role for oprF in Pseudomonas aeruginosa biofilm stimulation by subinhibitory antibiotics  Journal Articles
• A ketoreductase domain in the PksJ protein of the bacillaene assembly line carries out both α- and β-ketone reduction during chain growth  Journal Articles
• A new route for polar navigation  Journal Articles
• A novel function for the competence inducing peptide, XIP, as a cell death effector ofStreptococcus mutans  Journal Articles
• A novel inhibitor of Chlamydophila pneumoniae protein kinase D (PknD) inhibits phosphorylation of CdsD and suppresses bacterial replication  Journal Articles
• A novel nucleoid-associated protein specific to the actinobacteria  Journal Articles
• A phosphate transport system is required for symbiotic nitrogen fixation by Rhizobium meliloti  Journal Articles
• A phylogenetic analysis based on the gene encoding phosphoglycerate kinase  Journal Articles
• A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia, and the genus Borreliella gen. nov. containing the members of the Lyme disease Borrelia (Borrelia burgdorferi sensu lato complex)  Journal Articles
• A phylogenomic and molecular markers based analysis of the phylum Chlamydiae: proposal to divide the class Chlamydiia into two orders, Chlamydiales and Parachlamydiales ord. nov., and emended description of the class Chlamydiia  Journal Articles
• A protein factor which reduces the negative supercoiling requirement in the Mu DNA strand transfer reaction is Escherichia coli integration host factor  Journal Articles
• A putative 3‐hydroxyisobutyryl‐CoA hydrolase is required for efficient symbiotic nitrogen fixation in Sinorhizobium meliloti and Sinorhizobium fredii NGR234  Journal Articles
• A rifamycin inactivating phosphotransferase family shared by environmental and pathogenic bacteria  Journal Articles
• A shotgun lipidomics approach in Sinorhizobium meliloti as a tool in functional genomics  Journal Articles
• A shotgun lipidomics study of a putative lysophosphatidic acid acyl transferase (PlsC) in Sinorhizobium meliloti  Journal Articles
• A standardised method for interpreting the association between mutations and phenotypic drug resistance inMycobacterium tuberculosis  Journal Articles
• A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria  Journal Articles
• A widespread accessory protein family diversifies the effector repertoire of the type VI secretion system spike.  Journal Articles
• Acidic pH changes receptor binding specificity of Helicobacter pylori: a binary adhesion model in which surface heat shock (stress) proteins mediate sulfatide recognition in gastric colonization  Journal Articles
• Action at a distance in Mu DNA transposition: an enhancer-like element is the site of action of supercoiling relief activity by integration host factor (IHF).  Journal Articles
• Active Site Interference and Asymmetric Activation in the Chemotaxis Protein Histidine Kinase CheA  Journal Articles
• Active modification of host inflammation bySalmonella  Journal Articles
• Aerial development in Streptomyces coelicolor requires sortase activity  Journal Articles
• Agricultural soil denitrifiers possess extensive nitrite reductase gene diversity  Journal Articles
• AlgK Is a TPR-Containing Protein and the Periplasmic Component of a Novel Exopolysaccharide Secretin  Journal Articles
• An In Vivo High-Throughput Screening Approach Targeting the Type IV Secretion System Component VirB8 Identified Inhibitors of Brucella abortus 2308 Proliferation  Journal Articles
• An ABC-Type Cobalt Transport System Is Essential for Growth of Sinorhizobium melilotiat Trace Metal Concentrations  Journal Articles
• An Integrated Approach to Functional Genomics: Construction of a Novel Reporter Gene Fusion Library forSinorhizobium meliloti  Journal Articles
• An Ultrasensitive Bacterial Motor Revealed by Monitoring Signaling Proteins in Single Cells  Journal Articles
• An anti-CRISPR from a virulent streptococcal phage inhibits Streptococcus pyogenes Cas9  Journal Articles
• An automated Genomes-to-Natural Products platform (GNP) for the discovery of modular natural products  Journal Articles
• An engineered right‐handed coiled coil domain imparts extreme thermostability to the KcsA channel  Journal Articles
• An enterococcal phage protein inhibits type IV restriction enzymes involved in antiphage defense  Journal Articles
• An integrated AI knowledge graph framework of bacterial enzymology and metabolism.  Journal Articles
• An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp  Journal Articles
• An update on the management of urinary tract infections in the era of antimicrobial resistance  Journal Articles
• Analysis of the transcarbamoylation‐dehydration reaction catalyzed by the hydrogenase maturation proteins HypF and HypE  Journal Articles
• Angucyclinones rescue PhLOPS _A antibiotic activity by inhibiting Cfr-dependent antibiotic resistance  Journal Articles
• Another Bacillus sphaericus serotype harbouring strains very toxic to mosquito larvae: Serotype H6  Journal Articles
• Antagonistic Bacterial Interactions Help Shape Host-Symbiont Dynamics within the Fungus-Growing Ant-Microbe Mutualism  Journal Articles
• Antagonistic regulation of motility and transcriptome expression by RpoN and RpoS in Escherichia coli  Journal Articles
• Antibiotic adjuvants: multicomponent anti-infective strategies  Journal Articles
• Antibiotic susceptibility and molecular mechanisms of macrolide resistance in streptococci isolated from adult cystic fibrosis patients  Journal Articles
• Antibody against Haemophilus influenzae protein D in patients with chronic conditions causing secondary immunodeficiency  Journal Articles
• Application of the Character Compatibility Approach to Generalized Molecular Sequence Data: Branching Order of the Proteobacterial Subdivisions  Journal Articles
• Architecture and Pore Block of Eukaryotic Voltage-Gated Sodium Channels in View of NavAb Bacterial Sodium Channel Structure  Journal Articles
• Architecture of the Type II Secretion and Type IV Pilus Machineries  Journal Articles
• Autoregulation of the Drosophila disconnected Gene in the Developing Visual System  Journal Articles
• B. subtilis LytR-CpsA-Psr Enzymes Transfer Wall Teichoic Acids from Authentic Lipid-Linked Substrates to Mature Peptidoglycan In Vitro  Journal Articles
• Bacterial Chemotaxis: The motor connection  Journal Articles
• Bacterial resistance to antibiotics: Enzymatic degradation and modification  Journal Articles
• Bacterial type VII secretion: An important player in host‐microbe and microbe‐microbe interactions  Journal Articles
• Batrachotoxin acts as a stent to hold open homotetrameric prokaryotic voltage-gated sodium channels  Journal Articles
• Bifunctional Catalysis by CDP-ribitol Synthase:  Convergent Recruitment of Reductase and Cytidylyltransferase Activities in Haemophilus influenzae and Staphylococcus aureus  Journal Articles
• Binding Site Determinants for the LysR-Type Transcriptional Regulator PcaQ in the Legume Endosymbiont Sinorhizobium meliloti  Journal Articles
• Biofilm Formation by Hyperpiliated Mutants of Pseudomonas aeruginosa  Journal Articles
• Biogenesis of ribosomes: Free ribosomal protein pools in Escherichia coli  Journal Articles
• Biogeography of Bacterial Communities and Specialized Metabolism in Human Aerodigestive Tract Microbiomes  Journal Articles
• Biosynthesis of the Fluorinated Natural Product Nucleocidin in Streptomyces calvus Is Dependent on the bldA‐Specified Leu‐tRNA^UUA Molecule  Journal Articles
• BldD fromStreptomyces coelicoloris a non-essential global regulator that binds its own promoter as a dimer  Journal Articles
• BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2)  Journal Articles
• Breakage of bacterial DNA by nitrofuran derivatives.  Journal Articles
• Bringing order to a complex molecular machine: The assembly of the bacterial flagella  Journal Articles
• Building filaments in the air: aerial morphogenesis in bacteria and fungi  Journal Articles
• Building permits-control of type IV pilus assembly by PilB and its cofactors.  Journal Articles
• CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database  Journal Articles
• Carbapenem-resistant Gram-negative bacilli in Canada 2009-10: results from the Canadian Nosocomial Infection Surveillance Program (CNISP)  Journal Articles
• Carbapenemase-producing Enterobacterales in hospital drains in Southern Ontario, Canada  Journal Articles
• Cell Growth Inhibition upon Deletion of Four Toxin-Antitoxin Loci from the Megaplasmids of Sinorhizobium meliloti  Journal Articles
• Cellulolytic Streptomyces Strains Associated with Herbivorous Insects Share a Phylogenetically Linked Capacity To Degrade Lignocellulose  Journal Articles
• Changes to Its Peptidoglycan-Remodeling Enzyme Repertoire Modulate β-Lactam Resistance in Pseudomonas aeruginosa  Journal Articles
• Characterization of Cereulide Synthetase, a Toxin-Producing Macromolecular Machine  Journal Articles
• Characterization of DalS, an ATP-binding Cassette Transporter for d-Alanine, and Its Role in Pathogenesis in Salmonella enterica  Journal Articles
• Characterization of a Rifampin-Inactivating Glycosyltransferase from a Screen of Environmental Actinomycetes  Journal Articles
• Characterization of an inducible vancomycin resistance system in Streptomyces coelicolor reveals a novel gene (vanK) required for drug resistance  Journal Articles
• Characterization of rcsB and rcsC from Escherichia coli O9:K30:H12 and examination of the role of the rcs regulatory system in expression of group I capsular polysaccharides  Journal Articles
• Characterization of the Bacillus subtilis GTPase YloQ and its role in ribosome function  Journal Articles
• Characterization of the C-terminal Domain of a Potassium Channel from Streptomyces lividans (KcsA)  Journal Articles
• Characterization of the Depletion of 2- C -Methyl- d -Erythritol-2,4-Cyclodiphosphate Synthase in Escherichia coli and Bacillus subtilis  Journal Articles
• Characterization of the Putative Type III Secretion ATPase CdsN (Cpn0707) ofChlamydophila pneumoniae  Journal Articles
• Characterization of the Rhizobium (Sinorhizobium) meliloti high- and low-affinity phosphate uptake systems  Journal Articles
• Characterization of the β-Ketoadipate Pathway inSinorhizobium meliloti  Journal Articles
• Characterization ofStreptococcus milleriGroup Isolates from Expectorated Sputum of Adult Patients with Cystic Fibrosis  Journal Articles
• Chemical biology of tetracycline antibioticsThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.  Journal Articles
• Chlamydia Outer Protein (Cop) B from Chlamydia pneumoniae possesses characteristic features of a type III secretion (T3S) translocator protein  Journal Articles
• Chlamydia pneumoniae CopD Translocator Protein Plays a Critical Role in Type III Secretion (T3S) and Infection  Journal Articles
• Chlamydiae-specific proteins and indels: novel tools for studies  Journal Articles
• Citrobacter rodentium virulence in mice associates with bacterial load and the type III effector NleE  Journal Articles
• Cloning and Characterization of ectABC Cluster from Bacillus alcalophilus DTY1  Journal Articles
• Cloning and characterization of multiple groEL chaperonin-encoding genes in Rhizobium meliloti  Journal Articles
• Cloning of HSP60 (GroEL) operon from Clostridium perfringens using a polymerase chain reaction based approach  Journal Articles
• Cloning of a Chromosomal Region Responsible for Streptolysin S Production in Streptococcus pyogenes  Conferences
• Colorimetric biosensing of pathogens using gold nanoparticles  Journal Articles
• Common β‐lactamases inhibit bacterial biofilm formation  Journal Articles
• Communication in bacteria: an ecological and evolutionary perspective  Journal Articles
• Community-associated Methicillin-resistantStaphylococcus aureus, Canada  Journal Articles
• Compaction and control—the role of chromosome-organizing proteins inStreptomyces  Journal Articles
• Comparative Genetics of the rdar Morphotype inSalmonella  Journal Articles
• Comparative Genomics of Canadian Epidemic Lineages of Methicillin-Resistant Staphylococcus aureus  Journal Articles
• Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness  Journal Articles
• Comparative genomics of metabolic pathways inMycobacteriumspecies: gene duplication, gene decay and lateral gene transfer  Journal Articles
• Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants  Journal Articles
• Comparative transcriptome analysis ofAgrobacterium tumefaciensin response to plant signal salicylic acid, indole-3-acetic acid and γ-amino butyric acid reveals signalling cross-talk andAgrobacterium-plant co-evolution  Journal Articles
• Comparison of biochemical and genotypic speciation methods for vancomycin-resistant enterococci isolated from urban wastewater treatment plants  Journal Articles
• Conformational change and membrane association of the PutA protein are coincident with reduction of its FAD cofactor by proline.  Journal Articles
• Conformational changes in the motor ATPase CpaF facilitate a rotary mechanism of Tad pilus assembly.  Journal Articles
• Conserved indels in protein sequences that are characteristic of the phylum Actinobacteria  Journal Articles
• Conserved signature indels and signature proteins as novel tools for understanding microbial phylogeny and systematics: identification of molecular signatures that are specific for the phytopathogenic genera Dickeya, Pectobacterium and Brenneria  Journal Articles
• Conserved, unstructured regions in Pseudomonas aeruginosa PilO are important for type IVa pilus function  Journal Articles
• Contrasting Effects of Thrombin and the Thrombin Receptor Peptide, SFLLRN, on Aggregation and Release of 14C-Serotonin by Human Platelets Pretreated with Chymotrypsin or Serratia marcescens Protease  Other
• Control of RpoS in global gene expression of Escherichia coli in minimal media  Journal Articles
• Controlled Expression of an rpoS Antisense RNA Can Inhibit RpoS Function in Escherichia coli  Journal Articles
• Controlled induction of the RpoS regulon inEscherichia coli, using an RpoS-expressing plasmid  Journal Articles
• Coordinated Regulation of Two Independent Cell-Cell Signaling Systems and Swarmer Differentiation inSalmonella entericaSerovar Typhimurium  Journal Articles
• Cryo-EM analyses unveil details of mechanism and targocil-II mediated inhibition of S. aureus WTA transporter TarGH.  Journal Articles
• Cryo-EM characterization of the anydromuropeptide permease AmpG central to bacterial fitness and β-lactam antibiotic resistance.  Journal Articles
• Crystal Structure of StaL, a Glycopeptide Antibiotic Sulfotransferase from Streptomyces toyocaensis  Journal Articles
• Crystal Structure of the Streptomyces coelicolor Sortase E1 Transpeptidase Provides Insight into the Binding Mode of the Novel Class E Sorting Signal  Journal Articles
• Crystallographic analysis of Staphylococcus aureus LcpA, the primary wall teichoic acid ligase  Journal Articles
• Crystallographic analysis of TarI and TarJ, a cytidylyltransferase and reductase pair for CDP-ribitol synthesis in Staphylococcus aureus wall teichoic acid biogenesis  Journal Articles
• Cyclopropane fatty acyl synthase in Sinorhizobium meliloti  Journal Articles
• Cysteine biosynthesis, oxidative stress and antibiotic resistance in Salmonella typhimurium  Journal Articles
• DNA damage response coregulator ddrR affects many cellular pathways and processes in Acinetobacter baumannii 17978.  Journal Articles
• DNA packaging bias and differential expression of gene transfer agent genes within a population during production and release of the Rhodobacter capsulatus gene transfer agent, RcGTA  Journal Articles
• DdlN from Vancomycin-Producing Amycolatopsis orientalis C329.2 Is a VanA Homologue with d -Alanyl- d -Lactate Ligase Activity  Journal Articles
• Decoding Toxicity  Journal Articles
• DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products  Journal Articles
• Defining the networks that connect RNase III and RNase J-mediated regulation of primary and specialized metabolism in Streptomyces venezuelae.  Journal Articles
• Demonstration of the role of cell wall homeostasis in Staphylococcus aureus growth and the action of bactericidal antibiotics  Journal Articles
• Detecting selection using a single genome sequence of M. tuberculosis and P. falciparum  Journal Articles
• Detection and Characterization of a Phospholactoyl-Enzyme Adduct in the Reaction Catalyzed by UDP-N-acetylglucosamine Enolpyruvoyl Transferase, MurZ  Journal Articles
• Detection of methicillin-resistant Staphylococcus aureus (MRSA) from growth on mannitol salt oxacillin agar using PCR for nosocomial surveillance  Conferences
• Determination of 4‐hydroxyproline‐2‐epimerase activity by capillary electrophoresis: A stereoselective platform for inhibitor screening of amino acid isomerases  Journal Articles
• Development and use of a 293 cell line expressing lac repressor for the rescue of recombinant adenoviruses expressing high levels of rabies virus glycoprotein.  Journal Articles
• Development of Real-Time PCR Assays for Detection of the Streptococcus milleri Group from Cystic Fibrosis Clinical Specimens by Targeting the cpn60 and 16S rRNA Genes  Journal Articles
• Differences in the Mechanisms of Proapoptotic BH3 Proteins Binding to Bcl-XL and Bcl-2 Quantified in Live MCF-7 Cells  Journal Articles
• Dimeric c-di-GMP Is Required for Post-translational Regulation of Alginate Production in Pseudomonas aeruginosa  Journal Articles
• Dimerization Is Required for the Activity of the Protein Histidine Kinase CheA That Mediates Signal Transduction in Bacterial Chemotaxis  Journal Articles
• Dimerization and interactions of Brucella suis VirB8 with VirB4 and VirB10 are required for its biological activity  Journal Articles
• Direct detection of vanA and vanB genes in clinical specimens for rapid identification of vancomycin resistant enterococci (VRE) using multiplex PCR  Journal Articles
• Discovery of a proteolytic flagellin family in diverse bacterial phyla that assembles enzymatically active flagella  Journal Articles
• Discovery of novel bacterial toxins by genomics and computational biology  Journal Articles
• Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack.  Journal Articles
• Disruption of the Reductive 1,3-Propanediol Pathway Triggers Production of 1,2-Propanediol for Sustained Glycerol Fermentation by Clostridium pasteurianum  Journal Articles
• Distance-Based Configurational Entropy of Proteins from Molecular Dynamics Simulations  Journal Articles
• Distinction between Borrelia and Borreliella is more robustly supported by molecular and phenotypic characteristics than all other neighbouring prokaryotic genera: Response to Margos' et al. "The genus Borrelia reloaded" (PLoS ONE 13(12): e0208432)  Journal Articles
• Distinctive Protein Signatures Provide Molecular Markers and Evidence for the Monophyletic Nature of the Deinococcus-Thermus Phylum  Journal Articles
• Diverse NADase effector families mediate interbacterial antagonism via the type VI secretion system  Journal Articles
• Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae.  Journal Articles
• Drugs against superbugs: private lessons from bacteriophages  Journal Articles
• Dual Targeting Factors Are Required for LXG Toxin Export by the Bacterial Type VIIb Secretion System  Journal Articles
• Dual amyloid domains promote differential functioning of the chaplin proteins duringStreptomycesaerial morphogenesis  Journal Articles
• Duodenal bacterial proteolytic activity determines sensitivity to dietary antigen through protease-activated receptor-2  Journal Articles
• Dynamic fluorescence study of the interaction of lumazine protein with bacterial luciferases  Journal Articles
• Ecological Behavior ofLactobacillus reuteri100-23 Is Affected by Mutation of theluxSGene  Journal Articles
• Effect of wzx ( rfbX ) Mutations on A-Band and B-Band Lipopolysaccharide Biosynthesis in Pseudomonas aeruginosa O5  Journal Articles
• Effect of nitrogenase compounds from mutant and wild-type strains of Azotobacter on the dilution effect of nitrogenase  Journal Articles
• Effect of routine use of a multiplex PCR for detection of vanA- and vanB- mediated enterococcal resistance on accuracy, costs and earlier reporting  Journal Articles
• Effects of AttM lactonase on the pathogenicity ofStreptomyces scabies  Journal Articles
• Effects of Bacterial ACC Deaminase onBrassica napusGene Expression  Journal Articles
• Effects of soybean oil and dietary copper levels on nutrient digestion, ruminal fermentation, enzyme activity, microflora and microbial protein synthesis in dairy bulls  Journal Articles
• Elucidating the Function of the RpoS Regulon  Journal Articles
• Emerging and divergent roles of pyrophosphorylated nucleotides in bacterial physiology and pathogenesis  Journal Articles
• Enterococcus faecium N03-0072 carries a new VanD-type vancomycin resistance determinant: characterization of the VanD5 operon  Journal Articles
• Environmental Regulation of Pseudomonas aeruginosa PAO1 Las and Rhl Quorum-Sensing Systems  Journal Articles
• Essential magnetosome proteins MamI and MamL from magnetotactic bacteria interact in mammalian cells.  Journal Articles
• Estimating the Frequency of Horizontal Gene Transfer Using Phylogenetic Models of Gene Gain and Loss  Journal Articles
• Evaluation of a Latex Agglutination Test (MRSA-Screen) for Detection of Oxacillin Resistance in Coagulase-Negative Staphylococci  Journal Articles
• Evasive Maneuvers by Secreted Bacterial Proteins to Avoid Innate Immune Responses  Journal Articles
• Evidence for the presence of key chlorophyll-biosynthesis-related proteins in the genus Rubrobacter (Phylum Actinobacteria) and its implications for the evolution and origin of photosynthesis  Journal Articles
• Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selection of Expanded Gene Content and Coordinated Gene Expression  Journal Articles
• Evolution of Salmonella-Host Cell Interactions through a Dynamic Bacterial Genome  Journal Articles
• Evolution of the RpoS Regulon: Origin of RpoS and the Conservation of RpoS-Dependent Regulation in Bacteria  Journal Articles
• Evolutionary loss of the rdar morphotype in Salmonella as a result of high mutation rates during laboratory passage  Journal Articles
• Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle  Journal Articles
• Exploratory Growth in Streptomyces venezuelae Involves a Unique Transcriptional Program, Enhanced Oxidative Stress Response, and Profound Acceleration in Response to Glycerol  Journal Articles
• Expression and Secretion of Salmonella Pathogenicity Island-2 Virulence Genes in Response to Acidification Exhibit Differential Requirements of a Functional Type III Secretion Apparatus and SsaL  Journal Articles
• Expression of the Escherichia coli NRZ nitrate reductase is highly growth phase dependent and is controlled by RpoS, the alternative vegetative sigma factor  Journal Articles
• Expression, purification, crystallization and preliminary X-ray analysis ofPseudomonas aeruginosaPelD  Journal Articles
• Expression, purification, crystallization and preliminary X-ray analysis ofPseudomonas fluorescensAlgK  Journal Articles
• Expression, refolding, crystallization and preliminary X-ray analysis ofPseudomonas aeruginosaAlgE  Journal Articles
• Extending CRISPR-Cas9 Technology from Genome Editing to Transcriptional Engineering in the Genus Clostridium  Journal Articles
• Extracellular DNA-induced antimicrobial peptide resistance in Salmonella enterica serovar Typhimurium  Journal Articles
• Fluoroquinolone Resistance in Clinical Isolates of Streptococcus pneumoniae : Contributions of Type II Topoisomerase Mutations and Efflux to Levels of Resistance  Journal Articles
• FtsY Binds to the Escherichia coli Inner Membrane via Interactions with Phosphatidylethanolamine and Membrane Proteins  Journal Articles
• Function and Redundancy of the Chaplin Cell Surface Proteins in Aerial Hypha Formation, Rodlet Assembly, and Viability in Streptomyces coelicolor  Journal Articles
• Functional Conservation of the Polysaccharide Biosynthetic Protein WbpM and Its Homologues in Pseudomonas aeruginosa and Other Medically Significant Bacteria  Journal Articles
• Functional analysis of genes responsible for the synthesis of the B-band O antigen of Pseudomonas aeruginosa serotype O6 lipopolysaccharide The GenBank accession number for the sequence reported in this paper is AF035937.  Journal Articles
• Functional and Evolutionary Characterization of a Gene Transfer Agent’s Multilocus “Genome”  Journal Articles
• Functional relatedness in the Inv/Mxi‐Spa type III secretion system family  Journal Articles
• Functional role of conserved residues in the characteristic secretion NTPase motifs of the Pseudomonas aeruginosa type IV pilus motor proteins PilB, PilT and PilU  Journal Articles
• GCN4 enhances the stability of the pore domain of potassium channel KcsA  Journal Articles
• Galactitol catabolism in Sinorhizobium meliloti is dependent on a chromosomally encoded sorbitol dehydrogenase and a pSymB-encoded operon necessary for tagatose catabolism  Journal Articles
• Genetic and biochemical properties of an alkaline phosphatase PhoX family protein found in many bacteria  Journal Articles
• Genetic redundancy is prevalent within the 6.7 Mb Sinorhizobium meliloti genome  Journal Articles
• Genetically distinct pathways guide effector export through the type VI secretion system  Journal Articles
• Genetics of O-Antigen Biosynthesis inPseudomonas aeruginosa  Journal Articles
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria  Journal Articles
• Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A  Journal Articles
• Genome-based taxonomic framework for the class Negativicutes: division of the class Negativicutes into the orders Selenomonadales emend., Acidaminococcales ord. nov. and Veillonellales ord. nov.  Journal Articles
• Genomic Profiling of Iron-Responsive Genes in Salmonella enterica Serovar Typhimurium by High-Throughput Screening of a Random Promoter Library  Journal Articles
• Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933  Journal Articles
• Glycopeptide Sulfation Evades Resistance  Journal Articles
• GogB Is an Anti-Inflammatory Effector that Limits Tissue Damage during Salmonella Infection through Interaction with Human FBXO22 and Skp1  Journal Articles
• Gold biomineralization by a metallophore from a gold-associated microbe  Journal Articles
• Heterologous Complementation Reveals a Specialized Activity for BacA in the Medicago–Sinorhizobium meliloti Symbiosis  Journal Articles
• High-Throughput Chemical Screening for Inhibitors of Salmonella Pathogenicity Island 2  Journal Articles
• Homology Model of Dihydropyridine Receptor: Implications for L-type Ca2+ Channel Modulation by Agonists and Antagonists  Journal Articles
• Human peripheral gamma delta T cells recognize hsp60 molecules on Daudi Burkitt's lymphoma cells.  Journal Articles
• Humoral and cellular immune recognition of Helicobacter pylori proteins are not concordant  Journal Articles
• Hybrid sensor kinase PA1611 in Pseudomonas aeruginosa regulates transitions between acute and chronic infection through direct interaction with RetS  Journal Articles
• HypF, a Carbamoyl Phosphate-converting Enzyme Involved in [NiFe] Hydrogenase Maturation  Journal Articles
• Hyperpiliation, not loss of pilus retraction, reduces Pseudomonas aeruginosa pathogenicity.  Journal Articles
• IL-10 produced by trophoblast cells inhibits phagosome maturation leading to profound intracellular proliferation of Salmonella enterica Typhimurium  Journal Articles
• Identification and characterization of hydrogen peroxide-sensitive mutants of Escherichia coli: genes that require OxyR for expression  Journal Articles
• Identification and characterization of peptidoglycan-associated proteins in Neisseria gonorrhoeae  Journal Articles
• Identification and characterization of the siderochelin biosynthetic gene cluster via coculture.  Journal Articles
• Identification of Bacterial Proteins Mediating the Interactions Between Pseudomonas putida UW4 and Brassica napus (Canola)  Journal Articles
• Identification of Conserved, RpoS-Dependent Stationary-Phase Genes of Escherichia coli  Journal Articles
• Identification of Rhizobium-specific intergenic mosaic elements within an essential two-component regulatory system of Rhizobium species  Journal Articles
• Identification of TFPI as a receptor reveals recombination-driven receptor switching in Clostridioides difficile toxin B variants  Journal Articles
• Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component  Journal Articles
• Identification of a Bacillus anthracis specific indel in the yeaC gene and development of a rapid pyrosequencing assay for distinguishing B. anthracis from the B. cereus group  Journal Articles
• Identification of a Hydroxyproline Transport System in the Legume Endosymbiont Sinorhizobium meliloti  Journal Articles
• Identification of a broadly conserved family of enzymes that hydrolyze (p)ppApp  Journal Articles
• Identification of a common protease‐sensitive region in d‐alanyl‐d‐alanine and d‐alanyl‐d‐lactate ligases and photoaffinity labeling with 8‐azido ATP  Journal Articles
• Identification of a megaplasmid centromere reveals genetic structural diversity within the repABC family of basic replicons  Journal Articles
• Identification of coagulase-negative staphylococci in daily disposable contact lens wearers  Journal Articles
• Identification of distinctive molecular traits that are characteristic of the phylum “Deinococcus-Thermus” and distinguish its main constituent groups  Journal Articles
• Identification of mutants with altered phenazine production in Pseudomonas aeruginosa  Journal Articles
• Identification of plant growth-promoting bacteria-responsive proteins in cucumber roots under hypoxic stress using a proteomic approach  Journal Articles
• Identification of signature proteins that are distinctive of the Deinococcus-Thermus phylum.  Journal Articles
• Identification of the Binding Site of Brucella VirB8 Interaction Inhibitors  Journal Articles
• Identification of the Regulatory Logic Controlling Salmonella Pathoadaptation by the SsrA-SsrB Two-Component System  Journal Articles
• Immune Responses to the Mycobacterium tuberculosis -Specific Antigen ESAT-6 Signal Subclinical Infection among Contacts of Tuberculosis Patients  Journal Articles
• Importance of the RpoE Regulon in Maintaining the Lipid Bilayer during Antimicrobial Treatment with the Polycationic Agent, Chlorhexidine  Journal Articles
• In Silico Activation of KcsA K+ Channel by Lateral Forces Applied to the C-Termini of Inner Helices  Journal Articles
• Increased pyruvate orthophosphate dikinase activity results in an alternative gluconeogenic pathway in Rhizobium (Sinorhizobium) meliloti  Journal Articles
• Indirect stimulation of recombination in Escherichia coli K-12: dependence on recJ, uvrA, and uvrD  Journal Articles
• Induction of Escherichia coli hydroperoxidase I by acetate and other weak acids  Journal Articles
• Induction of antimicrobial activities in heterologous streptomycetes using alleles of the Streptomyces coelicolor gene absA1  Journal Articles
• Insertion of the bacterial type III translocon: not your average needle stick  Journal Articles
• Inter-replicon Gene Flow Contributes to Transcriptional Integration in the Sinorhizobium meliloti Multipartite Genome  Journal Articles
• Interactions between CdsD, CdsQ, and CdsL, Three PutativeChlamydophila pneumoniaeType III Secretion Proteins  Journal Articles
• Interactions between flagellar and type III secretion proteins in Chlamydia pneumoniae  Journal Articles
• Interactions of TonB-dependent transporter FoxA with siderophores and antibiotics that affect binding, uptake, and signal transduction  Journal Articles
• Intergenic Sequence Comparison of Escherichia coli Isolates Reveals Lifestyle Adaptations but Not Host Specificity  Journal Articles
• Interplay between Nucleoid-Associated Proteins and Transcription Factors in Controlling Specialized Metabolism in Streptomyces  Journal Articles
• Interpreting the Host-Pathogen Dialogue Through Microarrays  Journal Articles
• Interspecies Recombination Contributes Minimally to Fluoroquinolone Resistance in Streptococcus pneumoniae  Journal Articles
• Investigating the Role of Protein UnkG from the Pseudomonas putida UW4 in the Ability of the Bacterium to Facilitate Plant Growth  Journal Articles
• Iron and citrate export by a major facilitator superfamily pump regulates metabolism and stress resistance inSalmonellaTyphimurium  Journal Articles
• Isolation and sequencing of gene fusions carried by λplacMu specialized transducing phage  Journal Articles
• Kinetics, Stoichiometry, and Identification of the Reactive Thiolate in the Inactivation of UDP-GlcNAc Enolpyruvoyl Transferase by the Antibiotic Fosfomycin  Journal Articles
• Laboratory Characterization of Methicillin‐ResistantStaphylococcus aureusin Canadian Hospitals: Results of 5 Years of National Surveillance, 1995–1999  Journal Articles
• Lack of Correlation between Vacuolating Cytotoxin Activity, cagA Gene in Helicobacter pylori , and Peptic Ulcer Disease in Children  Journal Articles
• Lack of evidence that Pseudomonas aeruginosaAmpDh3‐PA0808 constitute a type VI secretion system effector–immunity pair  Journal Articles
• Lesions in Teichoic Acid Biosynthesis in Staphylococcus aureus Lead to a Lethal Gain of Function in the Otherwise Dispensable Pathway  Journal Articles
• Linear Free Energy Relationship Analysis of Transition State Mimicry by 3-Deoxy-d-arabino-heptulosonate-7-phosphate (DAHP) Oxime, a DAHP Synthase Inhibitor and Phosphate Mimic  Journal Articles
• Lipid Trafficking Controls Endotoxin Acylation in Outer Membranes of Escherichia coli  Journal Articles
• Location, Location, Location: an Antidote That Both Activates and Neutralizes a Toxin Used in Bacterial Warfare  Journal Articles
• Loss of malic enzymes leads to metabolic imbalance and altered levels of trehalose and putrescine in the bacterium Sinorhizobium meliloti  Journal Articles
• Loss of membrane‐bound lytic transglycosylases increases outer membrane permeability and β‐lactam sensitivity in Pseudomonas aeruginosa  Journal Articles
• Making Sense of Antisense in Antibiotic Drug Discovery  Journal Articles
• Malic Enzyme Cofactor and Domain Requirements for Symbiotic N ₂ Fixation by Sinorhizobium meliloti  Journal Articles
• Mannose- and Mannobiose-Specific Responses of the Insect-Associated Cellulolytic Bacterium Streptomyces sp. Strain SirexAA-E  Journal Articles
• Mapping and Regulation of Genes within Salmonella Pathogenicity Island 12 That Contribute to In Vivo Fitness of Salmonella enterica Serovar Typhimurium  Journal Articles
• Mapping the Sinorhizobium meliloti 1021 solute-binding protein-dependent transportome  Journal Articles
• Mechanism and Diversity of the Erythromycin Esterase Family of Enzymes  Journal Articles
• Mechanism of loading and translocation of type VI secretion system effector Tse6  Journal Articles
• Meropenem potentiation of aminoglycoside activity against Pseudomonas aeruginosa: involvement of the MexXY-OprM multidrug efflux system  Journal Articles
• Meta-analysis of the relationship between cagA seropositivity and gastric cancer  Journal Articles
• Metabolic differentiation in actively swarming Salmonella  Journal Articles
• Metal-Induced Isomerization Yields an Intracellular Chelator that Disrupts Bacterial Iron Homeostasis  Journal Articles
• Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12  Journal Articles
• Microtermolides A and B from Termite-Associated Streptomyces sp. and Structural Revision of Vinylamycin  Journal Articles
• Microtubules, mitochondria, and molecular chaperones: a new hypothesis for in vivo assembly of microtubules  Journal Articles
• Mimicking the human environment in mice reveals that inhibiting biotin biosynthesis is effective against antibiotic-resistant pathogens  Journal Articles
• Modeling P-Loops Domain of Sodium Channel: Homology with Potassium Channels and Interaction with Ligands  Journal Articles
• Modeling interactions between blocking and permeant cations in the NavMs channel  Journal Articles
• Modification of Pseudomonas aeruginosa Pa5196 Type IV Pilins at Multiple Sites with d -Ara f by a Novel GT-C Family Arabinosyltransferase, TfpW  Journal Articles
• Modulation of Pseudomonas aeruginosa gene expression by host microflora through interspecies communication  Journal Articles
• Modulation of secreted virulence factor genes by subinhibitory concentrations of antibiotics in Pseudomonas aeruginosa  Journal Articles
• Molecular basis for vancomycin resistance in Enterococcus faecium BM4147: biosynthesis of a depsipeptide peptidoglycan precursor by vancomycin resistance proteins VanH and VanA  Journal Articles
• Molecular mechanism of VanHst, an alpha-ketoacid dehydrogenase required for glycopeptide antibiotic resistance from a glycopeptide producing organism  Journal Articles
• Molecular mechanisms of antibiotic resistance  Journal Articles
• Molecular signatures (conserved indels) in protein sequences that are specific for the order Pasteurellales and distinguish two of its main clades  Journal Articles
• Molecular signatures (unique proteins and conserved indels) that are specific for the epsilon proteobacteria (Campylobacterales)  Journal Articles
• Molecular signatures for Bacillus species: demarcation of the Bacillus subtilis and Bacillus cereus clades in molecular terms and proposal to limit the placement of new species into the genus Bacillus  Journal Articles
• Molecular signatures for members of the genus Dehalococcoides and the class Dehalococcoidia  Journal Articles
• Molecular signatures for the class Coriobacteriia and its different clades; proposal for division of the class Coriobacteriia into the emended order Coriobacteriales , containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov.  Journal Articles
• Molecular signatures for the main phyla of photosynthetic bacteria and their subgroups  Journal Articles
• Molecular signatures for the phylum (class) Thermotogae and a proposal for its division into three orders (Thermotogales, Kosmotogales ord. nov. and Petrotogales ord. nov.) containing four families (Thermotogaceae, Fervidobacteriaceae fam. nov., Kosmotogaceae fam. nov. and Petrotogaceae fam. nov.) and a new genus Pseudothermotoga gen. nov. with five new combinations  Journal Articles
• Molecular signatures for the phylum Aquificae and its different clades: proposal for division of the phylum Aquificae into the emended order Aquificales, containing the families Aquificaceae and Hydrogenothermaceae, and a new order Desulfurobacteriales ord. nov., containing the family Desulfurobacteriaceae  Journal Articles
• Molecular signatures in protein sequences that are characteristic of cyanobacteria and plastid homologues  Journal Articles
• Molecular signatures in protein sequences that are characteristics of the phylum Aquificae  Journal Articles
• Morphological and biochemical changes inPseudomonas fluorescensbiofilms induced by sub-inhibitory exposure to antimicrobial agents  Journal Articles
• Mucosally Delivered Dendritic Cells Activate T Cells Independently of IL-12 and Endogenous APCs  Journal Articles
• Multiple conformations facilitate PilT function in the type IV pilus  Journal Articles
• Multiple histidines in the periplasmic domain of the Salmonella enterica sensor kinase SsrA enhance signaling in response to extracellular acidification  Journal Articles
• Mutational analysis of Salmonella translocated effector members SifA and SopD2 reveals domains implicated in translocation, subcellular localization and function  Journal Articles
• NAD⁺ ‐dependent malic enzyme of Rhizobium meliloti is required for symbiotic nitrogen fixation  Journal Articles
• Negative regulation of Salmonella pathogenicity island 2 is required for contextual control of virulence during typhoid  Journal Articles
• Negative regulation of sigma 54-dependent dctA expression by the transcriptional activator DctD  Journal Articles
• New Insights into 1-Aminocyclopropane-1-Carboxylate (ACC) Deaminase Phylogeny, Evolution and Ecological Significance  Journal Articles
• Newly designed primer pair revealed dominant and diverse comammox amoA gene in full-scale wastewater treatment plants  Journal Articles
• Nitrofuran induced mutagenesis and error prone repair in Escherichia coli  Journal Articles
• Non-ribosomal factors in ribosome subunit assembly are emerging targets for new antibacterial drugs  Journal Articles
• Novel Fecal Biomarkers That Precede Clinical Diagnosis of Ulcerative Colitis  Journal Articles
• Novel Molecular Synapomorphies Demarcate Different Main Groups/Subgroups of Plasmodium and Piroplasmida Species Clarifying Their Evolutionary Relationships  Journal Articles
• Novel Pathway for Arsenic Detoxification in the Legume Symbiont Sinorhizobium meliloti  Journal Articles
• Novel Proteins That Modulate Type IV Pilus Retraction Dynamics in Pseudomonas aeruginosa  Journal Articles
• Novel Role for PilNO in Type IV Pilus Retraction Revealed by Alignment Subcomplex Mutations  Journal Articles
• Novel approaches to discovery of antibacterial agents  Journal Articles
• Nucleotide Second Messenger‐Mediated Regulation of a Muralytic Enzyme in Streptomyces  Journal Articles
• Observing and modeling BMCC degradation by commercial cellulase cocktails with fluorescently labeled Trichoderma reseii Cel7A through confocal microscopy  Journal Articles
• Occurrence of Virulence and Antimicrobial Resistance Genes in Escherichia coli Isolates from Different Aquatic Ecosystems within the St. Clair River and Detroit River Areas  Journal Articles
• Orientation of bacteriorhodopsin in Halobacterium halobium as studied by selective proteolysis  Journal Articles
• Origin and Spread of Photosynthesis Based upon Conserved Sequence Features in Key Bacteriochlorophyll Biosynthesis Proteins  Journal Articles
• Origin of diderm (Gram-negative) bacteria: antibiotic selection pressure rather than endosymbiosis likely led to the evolution of bacterial cells with two membranes  Journal Articles
• Outbreak of Carbapenemase-Producing Enterobacteriaceae in a Regional Burn Center  Journal Articles
• Outbreak of Vancomycin-Susceptible Enterococcus faecium Containing the Wild-Type vanA Gene  Journal Articles
• Overexpression of the dctA gene in Rhizobium meliloti: effect on transport of C₄ dicarboxylates and symbiotic nitrogen fixation  Conferences
• Overexpression, Purification, and Characterization of VanX, a D-, D-Dipeptidase which Is Essential for Vancomycin Resistance in Enterococcus faecium BM4147  Journal Articles
• Overproduction, solubilization, purification and DNA‐binding properties of AmpR from Citrobacter freundii  Journal Articles
• P. aeruginosa SGNH Hydrolase-Like Proteins AlgJ and AlgX Have Similar Topology but Separate and Distinct Roles in Alginate Acetylation  Journal Articles
• Pathogenic adaptation of intracellular bacteria by rewiring a cis -regulatory input function  Journal Articles
• Pel Polysaccharide Biosynthesis Requires an Inner Membrane Complex Comprised of PelD, PelE, PelF, and PelG  Journal Articles
• PelA Deacetylase Activity Is Required for Pel Polysaccharide Synthesis in Pseudomonas aeruginosa  Journal Articles
• PelA and PelB proteins form a modification and secretion complex essential for Pel polysaccharide-dependent biofilm formation in Pseudomonas aeruginosa  Journal Articles
• PelX is a UDP-N-acetylglucosamine C4-epimerase involved in Pel polysaccharide–dependent biofilm formation  Journal Articles
• Periplasmic Domains of Pseudomonas aeruginosa PilN and PilO Form a Stable Heterodimeric Complex  Journal Articles
• Persistence of Salmonella on Egg Conveyor Belts Is Dependent on the Belt Type but Not on the rdar Morphotype  Journal Articles
• Perturbation of Pseudomonas aeruginosa peptidoglycan recycling by anti-folates and design of a dual-action inhibitor.  Journal Articles
• Pervasive Cryptic Epistasis in Molecular Evolution  Journal Articles
• Phenotypic Diversity Caused by Differential RpoS Activity among Environmental Escherichia coli Isolates  Journal Articles
• PhoPQ regulates acidic glycerophospholipid content of the Salmonella Typhimurium outer membrane  Journal Articles
• Phosphate limitation induces catalase expression inSinorhizobium meliloti,Pseudomonas aeruginosaandAgrobacterium tumefaciens  Journal Articles
• Phylogenetic Analysis of Mycoplasmas Based on Hsp70 Sequences: Cloning of the dnaK (hsp70) Gene Region of Mycoplasma capricolum  Journal Articles
• Phylogenetic analysis and homology modelling of a new Cry8A crystal protein expressed in a sporulating soil bacterium.  Journal Articles
• Phylogenetic analysis and molecular signatures defining a monophyletic clade of heterocystous cyanobacteria and identifying its closest relatives  Journal Articles
• Phylogenetic framework and molecular signatures for the class Chloroflexi and its different clades; proposal for division of the class Chloroflexi class. nov. into the suborder Chloroflexineae subord. nov., consisting of the emended family Oscillochloridaceae and the family Chloroflexaceae fam. nov., and the suborder Roseiflexineae subord. nov., containing the family Roseiflexaceae fam. nov.  Journal Articles
• Phylogenetic framework for the phylum Tenericutes based on genome sequence data: proposal for the creation of a new order Mycoplasmoidales ord. nov., containing two new families Mycoplasmoidaceae fam. nov. and Metamycoplasmataceae fam. nov. harbouring Eperythrozoon, Ureaplasma and five novel genera  Journal Articles
• Phylogenetic reconciliation reveals the natural history of glycopeptide antibiotic biosynthesis and resistance  Journal Articles
• Phylogenomic analyses of clostridia and identification of novel protein signatures that are specific to the genus Clostridium sensu stricto (cluster I)  Journal Articles
• Phylogenomic and molecular marker based studies to clarify the evolutionary relationships amongst Anoxybacillus species and demarcation of the family Anoxybacillaceae and some of its constituent genera.  Journal Articles
• Phylogenomics and comparative genomic studies delineate six main clades within the family Enterobacteriaceae and support the reclassification of several polyphyletic members of the family  Journal Articles
• Phylogenomics and molecular signatures for the order Neisseriales: proposal for division of the order Neisseriales into the emended family Neisseriaceae and Chromobacteriaceae fam. nov.  Journal Articles
• Phylogenomics and protein signatures elucidating the evolutionary relationships among the Gammaproteobacteria  Journal Articles
• Phylogenomics and signature proteins for the alpha Proteobacteria and its main groups  Journal Articles
• Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B  Journal Articles
• Phylogeny and molecular signatures (conserved proteins and indels) that are specific for the Bacteroidetes and Chlorobi species  Journal Articles
• Phylogeny and molecular signatures for the phylum Fusobacteria and its distinct subclades  Journal Articles
• Phylogeny and molecular signatures for the phylum Thermotogae and its subgroups  Journal Articles
• Phylogeny and shared conserved inserts in proteins provide evidence that Verrucomicrobia are the closest known free-living relatives of chlamydiae  Journal Articles
• PilM/N/O/P Proteins Form an Inner Membrane Complex That Affects the Stability of the Pseudomonas aeruginosa Type IV Pilus Secretin  Journal Articles
• PilMNOPQ from the Pseudomonas aeruginosa Type IV Pilus System Form a Transenvelope Protein Interaction Network That Interacts with PilA  Journal Articles
• Polymorphism and selection of rpoS in pathogenic Escherichia coli  Journal Articles
• Positive selection for loss of RpoS function in Escherichia coli  Journal Articles
• Potentiation of Aminoglycoside Activity in Pseudomonas aeruginosa by Targeting the AmgRS Envelope Stress-Responsive Two-Component System  Journal Articles
• Precise Deletion of tagD and Controlled Depletion of Its Product, Glycerol 3-Phosphate Cytidylyltransferase, Leads to Irregular Morphology and Lysis of Bacillus subtilis Grown at Physiological Temperature  Journal Articles
• Prediction of molecular mimicry candidates in human pathogenic bacteria  Journal Articles
• Preliminary X-ray data for the galactose binding protein from Salmonella typhimurium  Journal Articles
• Presence of UDP-N-acetylmuramyl-hexapeptides and -heptapeptides in enterococci and staphylococci after treatment with ramoplanin, tunicamycin, or vancomycin  Journal Articles
• Prevalence of Candida auris in Canadian acute care hospitals among at-risk patients, 2018  Journal Articles
• Primary structure of a human mitochondrial protein homologous to the bacterial and plant chaperonins and to the 65-kilodalton mycobacterial antigen.  Journal Articles
• Probing Teichoic Acid Genetics with Bioactive Molecules Reveals New Interactions among Diverse Processes in Bacterial Cell Wall Biogenesis  Journal Articles
• Prokaryotic homolog of tubulin? Consideration of FtsZ and glyceraldehyde 3-phosphate dehydrogenase as probable candidates.  Journal Articles
• Promoter prediction in the rhizobia  Journal Articles
• Prospects for Antibacterial Discovery and Development  Journal Articles
• Proteases from Bacillus: a new insight into the mechanism of action for rhizobacterial suppression of nematode populations  Journal Articles
• Protein Mobility in the Cytoplasm of Escherichia coli  Journal Articles
• Protein Phylogenies and Signature Sequences: A Reappraisal of Evolutionary Relationships among Archaebacteria, Eubacteria, and Eukaryotes  Journal Articles
• Protein Signatures Distinctive of Alpha Proteobacteria and Its Subgroups and a Model for α –Proteobacterial Evolution  Journal Articles
• Protein based molecular markers provide reliable means to understand prokaryotic phylogeny and support Darwinian mode of evolution  Journal Articles
• Protein interaction with ice  Journal Articles
• Protein signatures (molecular synapomorphies) that are distinctive characteristics of the major cyanobacterial clades  Journal Articles
• Protein-based phylogenies support a chimeric origin for the eukaryotic genome.  Journal Articles
• Proteome reference map for the plant growth‐promoting bacterium Pseudomonas putida UW4  Journal Articles
• Proteomic Analysis of a NAP1 Clostridium difficile Clinical Isolate Resistant to Metronidazole  Journal Articles
• Pseudomonas aeruginosa B-band O-antigen chain length is modulated by Wzz (Ro1)  Journal Articles
• Pseudomonas aeruginosa FpvB Is a High-Affinity Transporter for Xenosiderophores Ferrichrome and Ferrioxamine B  Journal Articles
• Pseudomonas aeruginosa Minor Pilins Are Incorporated into Type IV Pili  Journal Articles
• Pseudomonas aeruginosa defends against phages through type IV pilus glycosylation  Journal Articles
• Pseudomonas aeruginosa type IV minor pilins and PilY1 regulate virulence by modulating FimS-AlgR activity  Journal Articles
• Purification and characterization of VanR and the cytosolic domain of VanS: A two-component regulatory system required for vancomycin resistance in Enterococcus faecium BM4147  Journal Articles
• Pyonitrins A–D: Chimeric Natural Products Produced by Pseudomonas protegens  Journal Articles
• Pyruvate Is Synthesized by Two Pathways in Pea Bacteroids with Different Efficiencies for Nitrogen Fixation  Journal Articles
• Quantitative Mass Spectrometry Catalogues Salmonella Pathogenicity Island-2 Effectors and Identifies Their Cognate Host Binding Partners  Journal Articles
• Quorum Quenching in Agrobacterium tumefaciens : Chance or Necessity?  Journal Articles
• Quorum sensing in Escherichia coli , Salmonella typhimurium , and Vibrio harveyi : A new family of genes responsible for autoinducer production  Journal Articles
• Radical changes to chlamydial taxonomy are not necessary just yet.  Journal Articles
• Recent Developments in the Molecular Biology of Extremely Halophilic Bacteria  Journal Articles
• Receptor-mediated protein kinase activation and the mechanism of transmembrane signaling in bacterial chemotaxis  Journal Articles
• Redefining development in Streptomyces venezuelae: integrating exploration into the classical sporulating life cycle  Journal Articles
• Redesigned purification yields a fully functional PutA protein dimer from Escherichia coli.  Journal Articles
• Reduced Virulence of Group A Streptococcal Tn 916 Mutants That Do Not Produce Streptolysin S  Journal Articles
• Regulated expression of plant tRNA genes by the prokaryotic tet and lac repressors.  Journal Articles
• Regulation and Properties of PstSCAB, a High-Affinity, High-Velocity Phosphate Transport System ofSinorhizobium meliloti  Journal Articles
• Regulation of Phosphate Assimilation in Rhizobium (Sinorhizobium) meliloti  Journal Articles
• Regulation of a Novel Gene Cluster Involved in Secondary Metabolite Production in Streptomyces coelicolor  Journal Articles
• Regulation of a muralytic enzyme-encoding gene by two non-coding RNAs  Journal Articles
• Regulation of autoinducer production in Salmonella typhimurium  Journal Articles
• Regulation of hydroperoxidase (catalase) expression inEscherichia coli  Journal Articles
• Regulation of katF and katE in Escherichia coli K-12 by weak acids  Journal Articles
• Regulatory Evolution Drives Evasion of Host Inflammasomes by Salmonella Typhimurium  Journal Articles
• Relationship of Anti-60 kDa Heat Shock Protein and Anti-Cholesterol Antibodies to Cardiovascular Events  Journal Articles
• Repression of Acinetobacter baumannii DNA damage response requires DdrR-assisted binding of UmuDAb dimers to atypical SOS box.  Journal Articles
• Repression of Intracellular Virulence Factors in Salmonella by the Hha and YdgT Nucleoid-Associated Proteins  Journal Articles
• Response regulator output in bacterial chemotaxis  Journal Articles
• Resuscitation-Promoting Factors Are Cell Wall-Lytic Enzymes with Important Roles in the Germination and Growth of Streptomyces coelicolor  Journal Articles
• Rifampin phosphotransferase is an unusual antibiotic resistance kinase  Journal Articles
• Rifamycin antibiotic resistance by ADP-ribosylation: Structure and diversity of Arr  Journal Articles
• Robustness in bacterial chemotaxis  Journal Articles
• Role of PBPD1 in Stimulation of Listeria monocytogenes Biofilm Formation by Subminimal Inhibitory β-Lactam Concentrations  Journal Articles
• Role of RpoS in Virulence of Pathogens  Journal Articles
• Role of RpoS in the Virulence of Citrobacter rodentium  Journal Articles
• Role of α-Helical Coiled-coil Interactions in Receptor Dimerization, Signaling, and Adaptation during Bacterial Chemotaxis  Journal Articles
• Roles of LysM and LytM domains in resuscitation-promoting factor (Rpf) activity and Rpf-mediated peptidoglycan cleavage and dormant spore reactivation  Journal Articles
• Rox, a Rifamycin Resistance Enzyme with an Unprecedented Mechanism of Action  Journal Articles
• RpoE fine tunes expression of a subset of SsrB-regulated virulence factors in Salmonella enterica serovar Typhimurium  Journal Articles
• RpoS regulation of gene expression during exponential growth of Escherichia coli K12  Journal Articles
• RpoS-Regulated Genes ofEscherichia coliIdentified by RandomlacZFusion Mutagenesis  Journal Articles
• Salmonella Pathogenicity Island 2 Is Expressed Prior to Penetrating the Intestine  Journal Articles
• Salmonella Phage ST64B Encodes a Member of the SseK/NleB Effector Family  Journal Articles
• SapB and the chaplins: connections between morphogenetic proteins in Streptomyces coelicolor  Journal Articles
• Secreted Effectors Encoded within and outside of the Francisella Pathogenicity Island Promote Intramacrophage Growth  Journal Articles
• Seeing green bacteria in a new light: genomics-enabled studies of the photosynthetic apparatus in green sulfur bacteria and filamentous anoxygenic phototrophic bacteria  Journal Articles
• Selection and characterization of DNA aptamers for detection of glutamate dehydrogenase from Clostridium difficile  Journal Articles
• Sequence and structural homology between a mouse T-complex protein TCP-1 and the 'chaperonin' family of bacterial (GroEL, 60-65 kDa heat shock antigen) and eukaryotic proteins.  Journal Articles
• Sequencing of heat shock protein 70 (DnaK) homologs from Deinococcus proteolyticus and Thermomicrobium roseum and their integration in a protein-based phylogeny of prokaryotes  Journal Articles
• Signature Sequences in Diverse Proteins Provide Evidence of a Close Evolutionary Relationship Between the Deinococcus-Thermus Group and Cyanobacteria  Journal Articles
• Signature proteins for the major clades of Cyanobacteria  Journal Articles
• Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups  Journal Articles
• Signature proteins that are distinctive of alpha proteobacteria  Journal Articles
• Signature sequences in diverse proteins provide evidence for the late divergence of the Order Aquificales.  Journal Articles
• Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2  Journal Articles
• Silent but deadly: IS200 promotes pathogenicity in Salmonella Typhimurium  Journal Articles
• Similarity between the Rhizobium meliloti flip gene and pathogenicity-associated genes from animal and plant pathogens  Journal Articles
• Simultaneous Inhibition Assay for Human and Microbial Kinases via MALDI‐MS/MS  Journal Articles
• Site‐Selective Affinity Labelling of Maltose Binding Protein in Bacterial Cells  Journal Articles
• Small-Molecule Allosteric Triggers of Clostridium difficile Toxin B Auto-proteolysis as a Therapeutic Strategy  Journal Articles
• SmeA, a small membrane protein with multiple functions in Streptomyces sporulation including targeting of a SpoIIIE/FtsK‐like protein to cell division septa  Journal Articles
• Spatial Distribution and Mobility of the Ran GTPase in Live Interphase Cells  Journal Articles
• Spatially controlled simultaneous patterning of multiple growth factors in three-dimensional hydrogels  Journal Articles
• Specialized and shared functions of diguanylate cyclases and phosphodiesterases in Streptomyces development  Journal Articles
• Specialized killing across the domains of life by the type VI secretion systems of Pseudomonas aeruginosa.  Journal Articles
• Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria  Journal Articles
• Spectinomycin kinase from Legionella pneumophila. Characterization of substrate specificity and identification of catalytically important residues  Journal Articles
• Spray drying of a zinc complexing agent for inhalation therapy of pulmonary fibrosis.  Journal Articles
• SseA is required for translocation of Salmonella pathogenicity island-2 effectors into host cells  Journal Articles
• SseL Is a Salmonella -Specific Translocated Effector Integrated into the SsrB-Controlled Salmonella Pathogenicity Island 2 Type III Secretion System  Journal Articles
• Standard versus combined chemical, mechanical, and heat decontamination of hospital drains harboring carbapenemase-producing organisms (CPOs): A randomized controlled trial  Journal Articles
• Stationary Phase Expression of a Novel Escherichia coli Outer Membrane Lipoprotein and Its Relationship with Mammalian Apolipoprotein D  Journal Articles
• Stationary phase expression of the arginine biosynthetic operon argCBH in Escherichia coli  Journal Articles
• Streptococcus pneumoniae triggers progression of pulmonary fibrosis through pneumolysin  Journal Articles
• Streptogramins, Oxazolidinones, and Other Inhibitors of Bacterial Protein Synthesis  Journal Articles
• Streptomyces Exploration: Competition, Volatile Communication and New Bacterial Behaviours  Journal Articles
• Stronger correlation between antibiotic use and the incidence of Clostridium difficile determined by culture results instead of faecal toxin detection only  Journal Articles
• Structural Characterization of a Novel Chlamydia pneumoniae Type III Secretion-Associated Protein, Cpn0803  Journal Articles
• Structural Insights into the Inhibition of Undecaprenyl Pyrophosphate Synthase from Gram-Positive Bacteria  Journal Articles
• Structural Insights into the Regulation of Foreign Genes in Salmonella by the Hha/H-NS Complex  Journal Articles
• Structural and Biochemical Characterization of SrcA, a Multi-Cargo Type III Secretion Chaperone in Salmonella Required for Pathogenic Association with a Host  Journal Articles
• Structural and Functional Plasticity of Antibiotic Resistance Nucleotidylyltransferases Revealed by Molecular Characterization of Lincosamide Nucleotidylyltransferases Lnu(A) and Lnu(D)  Journal Articles
• Structural and Molecular Basis for Resistance to Aminoglycoside Antibiotics by the Adenylyltransferase ANT(2″)-Ia  Journal Articles
• Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane  Journal Articles
• Structural and phylogenetic analysis of a conserved actinobacteria-specific protein (ASP1; SCO1997) from Streptomyces coelicolor  Journal Articles
• Structural basis for alginate secretion across the bacterial outer membrane  Journal Articles
• Structural biology of membrane-intrinsic β-barrel enzymes: Sentinels of the bacterial outer membrane  Journal Articles
• Structural conservation and functional role of TfpY-like proteins in type IV pilus assembly.  Journal Articles
• Structural–Functional Studies of Burkholderia cenocepacia d-Glycero-β-d-manno-heptose 7-Phosphate Kinase (HldA) and Characterization of Inhibitors with Antibiotic Adjuvant and Antivirulence Properties  Journal Articles
• Structure and Function of the Glycopeptide N-methyltransferase MtfA, a Tool for the Biosynthesis of Modified Glycopeptide Antibiotics  Journal Articles
• Structure and Mechanism of Staphylococcus aureus TarS, the Wall Teichoic Acid β-glycosyltransferase Involved in Methicillin Resistance  Journal Articles
• Structure and Protein-Protein Interaction Studies on Chlamydia trachomatis Protein CT670 (YscO Homolog)  Journal Articles
• Structure and mechanism of TagA, a novel membrane-associated glycosyltransferase that produces wall teichoic acids in pathogenic bacteria  Journal Articles
• Structure and mechanism ofStaphylococcus aureusTarM, the wall teichoic acid α-glycosyltransferase  Journal Articles
• Structure of a bacterial Rhs effector exported by the type VI secretion system  Journal Articles
• Structure of the Cytoplasmic Region of PelD, a Degenerate Diguanylate Cyclase Receptor That Regulates Exopolysaccharide Production in Pseudomonas aeruginosa  Journal Articles
• Structure of the bacterial teichoic acid polymerase TagF provides insights into membrane association and catalysis  Journal Articles
• Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance  Journal Articles
• Studies of the Genetics, Function, and Kinetic Mechanism of TagE, the Wall Teichoic Acid Glycosyltransferase in Bacillus subtilis 168  Journal Articles
• Subinhibitory concentrations of tetracycline affect virulence gene expression in a multi-resistant Salmonella enterica subsp. enterica serovar Typhimurium DT104  Journal Articles
• Succinate Transport Is Not Essential for Symbiotic Nitrogen Fixation by Sinorhizobium meliloti or Rhizobium leguminosarum  Journal Articles
• Symbiont recognition of mutualistic bacteria by Acromyrmex leaf-cutting ants  Journal Articles
• Symbiotic nitrogen fixation by a nifA deletion mutant of Rhizobium meliloti: the role of an unusual ntrC allele  Journal Articles
• Synthase-dependent exopolysaccharide secretion in Gram-negative bacteria  Journal Articles
• Systematic review with meta‐analysis: association between Helicobacter pylori CagA seropositivity and odds of inflammatory bowel disease  Journal Articles
• Taming of a Poison: Biosynthesis of the NiFe-Hydrogenase Cyanide Ligands  Journal Articles
• Targeting Bacterial Secretion Systems: Benefits of Disarmament in the Microcosm  Journal Articles
• Targeting Two-Component Systems Uncovers a Small-Molecule Inhibitor of Salmonella Virulence  Journal Articles
• Targeting bacterial nickel transport with aspergillomarasmine A suppresses virulence-associated Ni-dependent enzymes  Journal Articles
• Target‐Mediated 5’‐Exonuclease Digestion of DNA Aptamers with RecJ to Modulate Rolling Circle Amplification for Biosensing  Journal Articles
• Techniques for Large-Scale Bacterial Genome Manipulation and Characterization of the Mutants with Respect to In Silico Metabolic Reconstructions  Journal Articles
• TetX Is a Flavin-dependent Monooxygenase Conferring Resistance to Tetracycline Antibiotics  Journal Articles
• Tetracycline-resistant coliforms in the effluent of the main sewage treatment plant in Hamilton, Ontario — do they have a common ancestral strain?  Journal Articles
• The Mycobacterium tuberculosis DosR Regulon Assists in Metabolic Homeostasis and Enables Rapid Recovery from Nonrespiring Dormancy  Journal Articles
• The N -Acetylmannosamine Transferase Catalyzes the First Committed Step of Teichoic Acid Assembly in Bacillus subtilis and Staphylococcus aureus  Journal Articles
• The bldD Gene of Streptomyces coelicolor A3(2): a Regulatory Gene Involved in Morphogenesis and Antibiotic Production  Journal Articles
• The yjeQ Gene Is Required for Virulence of Staphylococcus aureus  Journal Articles
• The Mycobacterium tuberculosis Ku C-terminus is a multi-purpose arm for binding DNA and LigD and stimulating ligation  Journal Articles
• The ARC2 response in Streptomcyes coelicolor requires the global regulatory genes afsR and afsS  Journal Articles
• The ATPase activity of an ‘essential’ Bacillus subtilis enzyme, YdiB, is required for its cellular function and is modulated by oligomerization  Journal Articles
• The Amino Terminus of Bacillus subtilis TagB Possesses Separable Localization and Functional Properties  Journal Articles
• The Best of Both Worlds—Streptomyces coelicolor and Streptomyces venezuelae as Model Species for Studying Antibiotic Production and Bacterial Multicellular Development  Journal Articles
• The BldD Protein from Streptomyces coelicolor Is a DNA-Binding Protein  Journal Articles
• The C. difficile toxin B membrane translocation machinery is an evolutionarily conserved protein delivery apparatus  Journal Articles
• The Complete Genome Sequence of Fibrobacter succinogenes S85 Reveals a Cellulolytic and Metabolic Specialist  Journal Articles
• The Composite Genome of the Legume Symbiont Sinorhizobium meliloti  Journal Articles
• The Conserved Tetratricopeptide Repeat-Containing C-Terminal Domain of Pseudomonas aeruginosa FimV Is Required for Its Cyclic AMP-Dependent and -Independent Functions  Journal Articles
• The Efflux Inhibitor Phenylalanine-Arginine Beta-Naphthylamide (PAβN) Permeabilizes the Outer Membrane of Gram-Negative Bacteria  Journal Articles
• The Evolving Epidemiology of Helicobacter pylori Infection and Gastric Cancer  Journal Articles
• The Genomic Enzymology of Antibiotic Resistance  Journal Articles
• The Himar1 mariner transposase cloned in a recombinant adenovirus vector is functional in mammalian cells  Journal Articles
• The Location of Substitutions and Bacterial Genome Arrangements  Journal Articles
• The LuxS family of bacterial autoinducers: biosynthesis of a novel quorum‐sensing signal molecule  Journal Articles
• The LysR-type PcaQ protein regulates expression of a protocatechuate-inducible ABC-type transport system in Sinorhizobium meliloti  Journal Articles
• The Mechanism of Protein Crystal Growth from Lipid Layers  Journal Articles
• The Natural Evolutionary Relationships among Prokaryotes  Journal Articles
• The Peptidoglycan-Binding Protein FimV Promotes Assembly of the Pseudomonas aeruginosa Type IV Pilus Secretin  Journal Articles
• The Phylogeny and Signature Sequences Characteristics ofFibrobacteres,Chlorobi, andBacteroidetes  Journal Articles
• The Platform Protein Is Essential for Type IV Pilus Biogenesis  Journal Articles
• The Pseudomonas aeruginosa PilSR Two-Component System Regulates Both Twitching and Swimming Motilities  Journal Articles
• The Pseudomonas aeruginosa T6SS Delivers a Periplasmic Toxin that Disrupts Bacterial Cell Morphology  Journal Articles
• The Sinorhizobium meliloti chromosomal origin of replication  Journal Articles
• The SseC translocon component in Salmonella enterica serovar Typhimurium is chaperoned by SscA  Journal Articles
• The T Cells Specific for the Carboxyl-Terminal Determinants of Self (Rat) Heat-Shock Protein 65 Escape Tolerance Induction and Are Involved in Regulation of Autoimmune Arthritis  Journal Articles
• The YebC Family Protein PA0964 Negatively Regulates thePseudomonas aeruginosaQuinolone Signal System and Pyocyanin Production  Journal Articles
• The antibacterial activity of a prophage-encoded fitness factor is neutralized by two cognate immunity proteins.  Journal Articles
• The attenuated virulence of a Burkholderia cenocepacia paaABCDE mutant is due to inhibition of quorum sensing by release of phenylacetic acid  Journal Articles
• The branching order and phylogenetic placement of species from completed bacterial genomes, based on conserved indels found in various proteins  Journal Articles
• The complete sequence of the 1,683-kb pSymB megaplasmid from the N ₂ -fixing endosymbiont Sinorhizobium meliloti  Journal Articles
• The emerging roles of bacterial proteases in intestinal diseases  Journal Articles
• The entericidin locus of Escherichia coli and its implications for programmed bacterial cell death  Journal Articles
• The evolution of substrate discrimination in macrolide antibiotic resistance enzymes  Journal Articles
• The expression of a novel antisense gene mediates incompatibility within the large repABC family of α‐proteobacterial plasmids  Journal Articles
• The gene cluster for chloramphenicol biosynthesis in Streptomyces venezuelae ISP5230 includes novel shikimate pathway homologues and a monomodular non-ribosomal peptide synthetase gene The GenBank accession number for the sequence reported in this paper is AF262220.  Journal Articles
• The glycopeptide antibiotic producer Streptomyces toyocaensis NRRL 15009 has both d-alanyl-d-alanine and d-alanyl-d-lactate ligases  Journal Articles
• The lysine acetylome of the nematocidal bacterium Bacillus nematocida and impact of nematode on the acetylome  Journal Articles
• The molecular mechanism of the type IVa pilus motors  Journal Articles
• The non-motile phenotype of Salmonella hha ydgT mutants is mediated through PefI-SrgD  Journal Articles
• The pdx genetic marker adjacent to the chloramphenicol biosynthesis gene cluster in Streptomyces venezuelae ISP5230: functional characterization The GenBank accession number for the sequence reported in this paper is AF286159.  Journal Articles
• The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes  Journal Articles
• The regulator gene phoB mediates phosphate stress‐controlled synthesis of the membrane lipid diacylglyceryl‐N,N,N‐trimethylhomoserine in Rhizobium (Sinorhizobium) meliloti  Journal Articles
• The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator  Journal Articles
• The tRNA ^arg Gene and engA Are Essential Genes on the 1.7-Mb pSymB Megaplasmid of Sinorhizobium meliloti and Were Translocated Together from the Chromosome in an Ancestral Strain  Journal Articles
• The tetracycline resistome  Journal Articles
• The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella  Journal Articles
• The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga–Flavobacterium–Bacteroides division The GenBank accession numbers for the sequences reported in this paper are AY017380, AY017381, AY017382 and AY017383.  Journal Articles
• ThemviNhomolog inBurkholderia pseudomalleiis essential for viability and virulence  Journal Articles
• Thin Aggregative Fimbriae and Cellulose Enhance Long-Term Survival and Persistence ofSalmonella  Journal Articles
• Thiostrepton Hijacks Pyoverdine Receptors To Inhibit Growth of Pseudomonas aeruginosa  Journal Articles
• Three rhamnosyltransferases responsible for assembly of the A‐band D‐rhamnan polysaccharide in Pseudomonas aeruginosa: a fourth transferase, WbpL, is required for the initiation of both A‐band and B‐band lipopolysaccharide synthesis  Journal Articles
• Tigecycline Is Modified by the Flavin-Dependent Monooxygenase TetX  Journal Articles
• Transcriptional Priming of Salmonella Pathogenicity Island-2 Precedes Cellular Invasion  Journal Articles
• Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two‐component regulator  Journal Articles
• Transcriptional regulation of ACC deaminase gene expression inPseudomonas putidaUW4  Journal Articles
• Transcriptional regulation ofsdiAby cAMP-receptor protein, LeuO, and environmental signals inSalmonella entericaserovar Typhimurium  Journal Articles
• Transcriptome Profiling and Functional Analysis ofAgrobacterium tumefaciensReveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved inAgrobacterium-Plant Interactions  Journal Articles
• Transfer of palmitate from phospholipids to lipid A in outer membranes of Gram-negative bacteria  Journal Articles
• Trichlorination of a Teicoplanin-Type Glycopeptide Antibiotic by the Halogenase StaI Evades Resistance  Journal Articles
• Type III secretion systems in symbiotic adaptation of pathogenic and non-pathogenic bacteria  Journal Articles
• Type IV Secretion System Core Component VirB8 from Brucella Binds to the Globular Domain of VirB5 and to a Periplasmic Domain of VirB6  Journal Articles
• Type IV pilins regulate their own expression via direct intramembrane interactions with the sensor kinase PilS  Journal Articles
• Type VI Secretion System-Associated Gene Clusters Contribute to Pathogenesis of Salmonella enterica Serovar Typhimurium  Journal Articles
• Unlocking the trove of metabolic treasures: activating silent biosynthetic gene clusters in bacteria and fungi  Journal Articles
• Updating the H‐antigen classification ofBacillus thuringiensis  Journal Articles
• Use of CDP-Glycerol as an Alternate Acceptor for the Teichoic Acid Polymerase Reveals that Membrane Association Regulates Polymer Length  Journal Articles
• Use of differential fluorescence induction and optical trapping to isolate environmentally induced genes  Journal Articles
• Using light to drive biosynthesis  Journal Articles
• Vancomycin-Variable Enterococci Can Give Rise to Constitutive Resistance during Antibiotic Therapy  Journal Articles
• Venturicidin A, A Membrane-active Natural Product Inhibitor of ATP synthase Potentiates Aminoglycoside Antibiotics  Journal Articles
• Vgb from Staphylococcus aureus inactivates streptogramin B antibiotics by an elimination mechanism not hydrolysis  Journal Articles
• YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit  Journal Articles
• l-Cysteine is required for induced antibiotic resistance in actively swarming Salmonella enterica serovar Typhimurium  Journal Articles
• mimicMe: a web server for prediction and analysis of host-like proteins in microbial pathogens  Journal Articles
• ‘Exploring’ the regulation of Streptomyces growth and development  Journal Articles