Oligonucleotide Array Sequence Analysis Concept

subject area of

• Staphylococcus aureus Nonribosomal Peptide Secondary Metabolites Regulate Virulence  Academic Article
• WNT2promoter methylation in human placenta is associated with low birthweight percentile in the neonate  Academic Article
• A FLEXIBLE NONPARAMETRIC APPROACH TO FIND CANDIDATE GENES ASSOCIATED WITH DISEASE IN MICROARRAY EXPERIMENTS  Academic Article
• A Gene Signature for Predicting Outcome in Patients with Basal-like Breast Cancer  Academic Article
• A Genomic Score Prognostic of Outcome in Trauma Patients  Academic Article
• A Multivariate Growth Curve Model for Ranking Genes in Replicated Time Course Microarray Data  Academic Article
• A Virulence and Antimicrobial Resistance DNA Microarray Detects a High Frequency of Virulence Genes in Escherichia coli Isolates from Great Lakes Recreational Waters  Academic Article
• A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis  Academic Article
• A genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease  Academic Article
• A genome-wide association study of sporadic ALS in a homogenous Irish population  Academic Article
• Activation of theWT1tumor suppressor gene promoter by Pea3  Academic Article
• Agreement in DNA methylation levels from the Illumina 450K array across batches, tissues, and time  Academic Article
• An ABC-Type Cobalt Transport System Is Essential for Growth of Sinorhizobium melilotiat Trace Metal Concentrations  Academic Article
• An RNAi Screen Identifies Msi2 and Prox1 as Having Opposite Roles in the Regulation of Hematopoietic Stem Cell Activity  Academic Article
• An algorithm to discover gene signatures with predictive potential  Academic Article
• An update on apocrine lesions of the breast  Academic Article
• Analysis of factorial time-course microarrays with application to a clinical study of burn injury  Academic Article
• Analysis of global mRNA expression in human skeletal muscle during recovery from endurance exercise  Academic Article
• Analysis of the Human Fetal Liver Hematopoietic Microenvironment  Academic Article
• Ancient pathogen DNA in archaeological samples detected with a Microbial Detection Array  Academic Article
• Apoptosis is signalled early by low doses of ionising radiation in a radiation-induced bystander effect  Academic Article
• Assessment of methylation level prediction accuracy in methyl-DNA immunoprecipitation and sodium bisulfite based microarray platforms  Academic Article
• Association Between Levels of Coding Sequence Divergence and Gene Misregulation in Drosophila Male Hybrids  Academic Article
• Asymmetric segregation and self-renewal of hematopoietic stem and progenitor cells with endocytic Ap2a2  Academic Article
• BOND: Basic OligoNucleotide Design  Academic Article
• Bone marrow cells from patients with Shwachman-Diamond syndrome abnormally express genes involved in ribosome biogenesis and RNA processing  Academic Article
• Cell autonomous roles for AP-2α in lens vesicle separation and maintenance of the lens epithelial cell phenotype  Academic Article
• Cellular processes of v-Src transformation revealed by gene profiling of primary cells - Implications for human cancer  Academic Article
• ChIP-on-Chip Analysis of In Vivo Mutant p53 Binding To Selected Gene Promoters  Academic Article
• Changes in the transcriptome of abdominal subcutaneous adipose tissue in response to short-term overfeeding in lean and obese men  Academic Article
• Characterization of a Novel Primary Mammary Tumor Cell Line Reveals that Cyclin D1 Is Regulated by the Type I Insulin-Like Growth Factor Receptor  Academic Article
• Characterization of formulated microbial products by denaturing gradient gel electrophoresis, total cellular fatty acid analysis, and DNA microarray analysis  Academic Article
• Chemical Genomic Approaches to Study Model Microbes  Academic Article
• Chlamydiae Host Cell Interactions Revealed Using DNA Microarrays  Academic Article
• Clinical Validation of Fragile X Syndrome Screening by DNA Methylation Array  Academic Article
• Clinical Validation of a Genome-Wide DNA Methylation Assay for Molecular Diagnosis of Imprinting Disorders  Academic Article
• Clinical and molecular delineation of the 17q21.31 microdeletion syndrome  Academic Article
• Common reduction of the Raf kinase inhibitory protein in clear cell renal cell carcinoma  Academic Article
• Comparison of Tolerated and Rejected Islet Grafts: A Gene Expression Study  Academic Article
• Comprehensive Analysis of Genomic Variation in the LPA Locus and Its Relationship to Plasma Lipoprotein(a) in South Asians, Chinese, and European Caucasians  Academic Article
• Comprehensive analysis of mammalian miRNA* species and their role in myeloid cells  Academic Article
• Comprehensive microRNA expression profiling of the hematopoietic hierarchy  Academic Article
• Concept, Design and Implementation of a Cardiovascular Gene-Centric 50 K SNP Array for Large-Scale Genomic Association Studies  Academic Article
• Control of RpoS in global gene expression of Escherichia coli in minimal media  Academic Article
• Controlling Microarray Spot Morphology with Polymer Liftoff Arrays  Academic Article
• Cost-effectiveness of Genome and Exome Sequencing in Children Diagnosed with Autism Spectrum Disorder  Conference Paper
• DNA methylation age calculators reveal association with diabetic neuropathy in type 1 diabetes  Academic Article
• Data mining of gene expression changes in Alzheimer brain  Academic Article
• Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis  Academic Article
• Direct Profiling of Cancer Biomarkers in Tumor Tissue Using a Multiplexed Nanostructured Microelectrode Integrated Circuit  Academic Article
• Direct, Electronic MicroRNA Detection for the Rapid Determination of Differential Expression Profiles  Academic Article
• Discovery of Novel Hypermethylated Genes in Prostate Cancer Using Genomic CpG Island Microarrays  Academic Article
• Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray  Academic Article
• Disruption at the PTCHD1 Locus on Xp22.11 in Autism Spectrum Disorder and Intellectual Disability  Academic Article
• EB1 Levels Are Elevated in Ascorbic Acid (AA)-stimulated Osteoblasts and Mediate Cell-Cell Adhesion-induced Osteoblast Differentiation  Academic Article
• ERM is required for transcriptional control of the spermatogonial stem cell niche  Academic Article
• Eccentric Exercise Activates Novel Transcriptional Regulation of Hypertrophic Signaling Pathways Not Affected by Hormone Changes  Academic Article
• Effects of Bacterial ACC Deaminase on Brassica napus Gene Expression  Academic Article
• Epithelial-Restricted Gene Profile of Primary Cultures from Human Prostate Tumors: A Molecular Approach to Predict Clinical Behavior of Prostate Cancer  Academic Article
• Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD  Academic Article
• Estimating Number of Clusters Based on a General Similarity Matrix with Application to Microarray Data  Academic Article
• Estrogen independent gene expression defines clinically relevant subgroups of estrogen receptor positive breast cancer  Academic Article
• Estrogen-Dependent Dynamic Profile of eNOS-DNA Associations in Prostate Cancer  Academic Article
• Estrogen-responsive gene networks in the teleost liver: What are the key molecular indicators?  Academic Article
• Ets-1 Regulates Energy Metabolism in Cancer Cells  Academic Article
• Expression profiling of familial breast cancers demonstrates higher expression of FGFR2 in BRCA2-associated tumors  Academic Article
• Follistatin promotes adipocyte differentiation, browning, and energy metabolism  Academic Article
• Forward and reverse genetics to identify genes involved in the age-related resistance response inArabidopsis thaliana  Academic Article
• Functional Divergence in the Arabidopsis  -1,3-Glucanase Gene Family Inferred by Phylogenetic Reconstruction of Expression States  Academic Article
• Gene Expression Profiling of Human Cancers  Conference Paper
• Gene Expression, Fiber Type, and Strength Are Similar Between Left and Right Legs in Older Adults  Academic Article
• Gene Regulation Divergence Is a Major Contributor to the Evolution of Dobzhansky–Muller Incompatibilities between Species of Drosophila  Academic Article
• Gene expression endpoints following chronic waterborne copper exposure in a genomic model organism, the zebrafish, Danio rerio  Academic Article
• Gene expression profiling in human skeletal muscle during recovery from eccentric exercise  Academic Article
• Gene expression profiling in the Cynomolgus macaque Macaca fascicularis shows variation within the normal birth range  Academic Article
• Gene expression using microarrays in transplant recipients at risk of EBV lymphoproliferation after organ transplantation: Preliminary proof-of-concept  Academic Article
• Genetic Changes Accompanying the Evolution of Host Specialization in Drosophila sechellia  Academic Article
• Genetic Determinants of “Cognitive Impairment, No Dementia”  Academic Article
• Genetic loci associated with delayed clearance of Plasmodium falciparum following artemisinin treatment in Southeast Asia  Academic Article
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria  Academic Article
• Genome variation in the symbiotic nitrogen-fixing bacteriumSinorhizobium meliloti  Academic Article
• Genome-Wide DNA Methylation Analysis of Chinese Patients with Systemic Lupus Erythematosus Identified Hypomethylation in Genes Related to the Type I Interferon Pathway  Academic Article
• Genome-wide expression profiling of maize in response to individual and combined water and nitrogen stresses  Academic Article
• Genomic Consequences of Background Effects onscallopedMutant Expressivity in the Wing ofDrosophila melanogaster  Academic Article
• Genomic Instability in Regions Adjacent to a Highly Conserved pch Prophage in Escherichia coli O157:H7 Generates Diversity in Expression Patterns of the LEE Pathogenicity Island  Academic Article
• Global analyses of gene expression in early experimental osteoarthritis  Academic Article
• Global and targeted gene expression and protein content in skeletal muscle of young men following short-term creatine monohydrate supplementation  Academic Article
• Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933  Academic Article
• Gob-5 Is Not Essential for Mucus Overproduction in Preclinical Murine Models of Allergic Asthma  Academic Article
• Hepatic Gene Expression During Endotoxemia  Academic Article
• Herpes Simplex Virus Triggers and Then Disarms a Host Antiviral Response  Academic Article
• High Interleukin-15 Expression Characterizes Childhood Acute Lymphoblastic Leukemia With Involvement of the CNS  Academic Article
• Histone Modification Profiling in Normal and Transformed Human Embryonic Stem Cells Using Micro Chromatin Immunoprecipitation, Scalable to Genome-Wide Microarray Analyses  Academic Article
• Hormone Receptor and ERBB2 Status in Gene Expression Profiles of Human Breast Tumor Samples  Academic Article
• How consistent are we? Interlaboratory comparison study in fathead minnows using the model estrogen 17α-ethinylestradiol to develop recommendations for environmental transcriptomics  Academic Article
• Human Adipose Tissue Macrophages Display Activation of Cancer-related Pathways  Academic Article
• Human Embryonic Stem Cell-Derived Hematopoietic Cells Maintain Core Epigenetic Machinery of the Polycomb Group/Trithorax Group Complexes Distinctly from Functional Adult Hematopoietic Stem Cells  Academic Article
• Human transcriptome array for high-throughput clinical studies  Academic Article
• Hypermetabolic Syndrome as a Consequence of Repeated Psychological Stress in Mice  Academic Article
• Identification and evaluation of network modules for the prognosis of basal-like breast cancer  Academic Article
• Identification of Direct p73 Target Genes Combining DNA Microarray and Chromatin Immunoprecipitation Analyses  Academic Article
• Identification of the Regulatory Logic Controlling Salmonella Pathoadaptation by the SsrA-SsrB Two-Component System  Academic Article
• Impact of IQ on the diagnostic yield of chromosomal microarray in a community sample of adults with schizophrenia  Academic Article
• Infectious salmon anaemia virus (ISAV) isolates induce distinct gene expression responses in the Atlantic salmon (Salmo salar) macrophage/dendritic-like cell line TO, assessed using genomic techniques  Academic Article
• Inhibition of endogenous MTF-1 signaling in zebrafish embryos identifies novel roles for MTF-1 in development  Academic Article
• Insulin prevents liver damage and preserves liver function in lipopolysaccharide-induced endotoxemic rats  Academic Article
• Integrative analysis of multiple gene expression profiles with quality-adjusted effect size models  Academic Article
• Interferon-Mediated Immunopathological Events Are Associated with Atypical Innate and Adaptive Immune Responses in Patients with Severe Acute Respiratory Syndrome  Academic Article
• Interleukin-1 in combination with oncostatin M up-regulates multiple genes in chondrocytes: Implications for cartilage destruction and repair  Academic Article
• Interpreting the Host-Pathogen Dialogue Through Microarrays  Academic Article
• Investigating the Link between Molecular Subtypes of Glioblastoma, Epithelial-Mesenchymal Transition, and CD133 Cell Surface Protein  Academic Article
• Issues for reporting results  Academic Article
• Label-free detection of nucleic acid and protein microarrays by scanning Kelvin nanoprobe  Academic Article
• Leukaemia-related gene expression in bone marrow cells from patients with the preleukaemic disorder Shwachman?Diamond syndrome  Academic Article
• Limb Immobilization Induces a Coordinate Down-Regulation of Mitochondrial and Other Metabolic Pathways in Men and Women  Academic Article
• Loss of Hepatocyte-Nuclear-Factor-4α Affects Colonic Ion Transport and Causes Chronic Inflammation Resembling Inflammatory Bowel Disease in Mice  Academic Article
• Lunatic Fringe Deficiency Cooperates with the Met/Caveolin Gene Amplicon to Induce Basal-like Breast Cancer  Academic Article
• Manitoba-oculo-tricho-anal (MOTA) syndrome is caused by mutations in FREM1  Academic Article
• Massage Therapy Attenuates Inflammatory Signaling After Exercise-Induced Muscle Damage  Academic Article
• Menin Links the Stress Response to Genome Stability in Drosophila melanogaster  Academic Article
• Metronomic PDT and Cell Death Pathways  Academic Article
• MicroRNA Signature in Metastatic Colorectal Cancer Patients Treated With Anti-EGFR Monoclonal Antibodies  Academic Article
• Microarray Meta-Analysis Identifies Acute Lung Injury Biomarkers in Donor Lungs That Predict Development of Primary Graft Failure in Recipients  Academic Article
• Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12  Academic Article
• Microarray analysis on Runx2-deficient mouse embryos reveals novel Runx2 functions and target genes during intramembranous and endochondral bone formation  Academic Article
• Microarray-based cytogenetic profiling reveals recurrent and subtype-associated genomic copy number aberrations in feline sarcomas  Academic Article
• Model-based clustering of microarray expression data via latent Gaussian mixture models  Academic Article
• Modulation of Hexa-Acyl Pyrophosphate Lipid A Population under Escherichia coli Phosphate (Pho) Regulon Activation  Academic Article
• Modulation of the Vitamin D3 Response by Cancer-Associated Mutant p53  Academic Article
• Molecular Diagnosis of Myopathies  Academic Article
• Molecular Diagnostic Yield of Chromosomal Microarray Analysis and Whole-Exome Sequencing in Children With Autism Spectrum Disorder  Academic Article
• Molecular Evidence for OCT4-Induced Plasticity in Adult Human Fibroblasts Required for Direct Cell Fate Conversion to Lineage Specific Progenitors  Academic Article
• Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila  Academic Article
• Mouse models of cystathionine β‐synthase deficiency reveal significant threshold effects of hyperhomocysteinemia  Academic Article
• Multi-Ethnic Genetic Association Study of Carotid Intima-Media Thickness Using a Targeted Cardiovascular SNP Microarray  Academic Article
• Multiple Imprinted and Stemness Genes Provide a Link between Normal and Tumor Progenitor Cells of the Developing Human Kidney  Academic Article
• Multiple genes in human 20q13 chromosomal region are involved in an advanced prostate cancer xenograft.  Academic Article
• Neonates harbour highly active γδ T cells with selective impairments in preterm infants  Academic Article
• New Tools for Investigating the Comparative Biology of Caenorhabditis  briggsae and C. elegans  Academic Article
• Notch-HES1 signaling axis controls hemato-endothelial fate decisions of human embryonic and induced pluripotent stem cells  Academic Article
• Occurrence of Virulence and Antimicrobial Resistance Genes in Escherichia coli Isolates from Different Aquatic Ecosystems within the St. Clair River and Detroit River Areas  Academic Article
• Overexpression of vimentin: role in the invasive phenotype in an androgen-independent model of prostate cancer.  Academic Article
• PML, YAP, and p73 Are Components of a Proapoptotic Autoregulatory Feedback Loop  Academic Article
• Parathyroid hormone-related protein (PTHrP) modulates adhesion, migration and invasion in bone tumor cells  Academic Article
• Peripheral Blood Gene Expression Changes during Allergen Inhalation Challenge in Atopic Asthmatic Individuals  Academic Article
• Polar body array CGH for prediction of the status of the corresponding oocyte. Part I: clinical results  Academic Article
• Polar body array CGH for prediction of the status of the corresponding oocyte. Part II: technical aspects  Academic Article
• Progressive Transforming Growth Factor β1–induced Lung Fibrosis Is Blocked by an Orally Active ALK5 Kinase Inhibitor  Academic Article
• Protein-leucine ingestion activates a regenerative inflammo-myogenic transcriptome in skeletal muscle following intense endurance exercise  Academic Article
• Rad is temporally regulated within myogenic progenitor cells during skeletal muscle regeneration  Academic Article
• Real-time processing and compression of DNA microarray images  Academic Article
• Role of insulin-like growth factor binding proteins (IGFBPs) in breast cancer proliferation and metastasis.  Academic Article
• Role of the transcription factor Ets-1 in cisplatin resistance  Academic Article
• RpoS regulation of gene expression during exponential growth of Escherichia coli K12  Academic Article
• Scanning Kelvin nanoprobe detection in materials science and biochemical analysis  Academic Article
• Sequence overlap between autosomal and sex-linked probes on the Illumina HumanMethylation27 microarray  Academic Article
• Severe Injury Is Associated With Insulin Resistance, Endoplasmic Reticulum Stress Response, and Unfolded Protein Response  Academic Article
• Severe intellectual disability and autistic features associated with microduplication 2q23.1  Academic Article
• Sex Differences in Global mRNA Content of Human Skeletal Muscle  Academic Article
• Shifting of Immune Responsiveness to House Dust Mite by Influenza A Infection: Genomic Insights  Academic Article
• Single-Species Microarrays and Comparative Transcriptomics  Academic Article
• Single-Step Printable Hydrogel Microarray Integrating Long-Chain DNA for the Discriminative and Size-Specific Sensing of Nucleic Acids  Academic Article
• SseL Is a Salmonella -Specific Translocated Effector Integrated into the SsrB-Controlled Salmonella Pathogenicity Island 2 Type III Secretion System  Academic Article
• Subinhibitory concentrations of tetracycline affect virulence gene expression in a multi-resistant Salmonella enterica subsp. enterica serovar Typhimurium DT104  Academic Article
• Targeting prostate cancer with HTI-286, a synthetic analog of the marine sponge product hemiasterlin  Academic Article
• Tests for differential gene expression using weights in oligonucleotide microarray experiments  Academic Article
• The GDNF Target Vsnl1 Marks the Ureteric Tip  Academic Article
• The clinical need for the RVP test  Academic Article
• The development of a DNA microarray-based assay for the characterization of commercially formulated microbial products  Academic Article
• The effects of lymph node status on predicting outcome in ER+ /HER2- tamoxifen treated breast cancer patients using gene signatures  Academic Article
• The gene associated with trichorhinophalangeal syndrome in humans is overexpressed in breast cancer  Academic Article
• The post-genomic era: workshop on chromatin immunoprecipitation-related techniques  Academic Article
• The search for autism disease genes  Academic Article
• Therapeutic Potential of Spleen Tyrosine Kinase Inhibition for Treating High-Risk Precursor B Cell Acute Lymphoblastic Leukemia  Academic Article
• Topoisomerase II Alpha and Responsiveness of Breast Cancer to Adjuvant Chemotherapy  Academic Article
• Toxicogenomic Analysis of Mainstream Tobacco Smoke-Exposed Mice Reveals Repression of Plasminogen Activator Inhibitor-1 Gene in Heart  Academic Article
• Transcriptional Profiling Implicates Novel Interactions between Abiotic Stress and Hormonal Responses in Thellungiella, a Close Relative of Arabidopsis    Academic Article
• Transcriptional profiling and regulation of the extracellular matrix during muscle regeneration  Academic Article
• Transcriptional upregulation of p21/WAF/Cip1 in myeloid leukemic blasts expressing AML1-ETO  Academic Article
• Transcriptome Profiling and Functional Analysis of Agrobacterium tumefaciens Reveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved in Agrobacterium -Plant Interactions  Academic Article
• Transcriptome and translational signaling following endurance exercise in trained skeletal muscle: impact of dietary protein  Academic Article
• Transcriptomic and proteomic analyses in bone tumor cells: Deciphering parathyroid hormone-related protein regulation of the cell cycle and apoptosis  Academic Article
• Understanding Skeletal Muscle Adaptation to Exercise Training in Humans: Contributions from Microarray Studies  Academic Article
• Up-regulation of Hsp27 Plays a Role in the Resistance of Human Colon Carcinoma HT29 Cells to Photooxidative Stress¶  Academic Article
• Use of Buffy Coat miRNA Profiling for Breast Cancer Prediction in Healthy Women  Academic Article
• Using the ratio of means as the effect size measure in combining results of microarray experiments  Academic Article
• VDR primary targets by genome-wide transcriptional profiling  Academic Article
• VSV strains with defects in their ability to shutdown innate immunity are potent systemic anti-cancer agents  Academic Article
• cDNA Array Analysis of Altered Gene Expression in Human Endothelial Cells in Response toChlamydia pneumoniaeInfection  Academic Article
• cDNA array reveals differential gene expression following chronic neuroleptic administration: implications of synapsin II in haloperidol treatment  Academic Article
• cDNA array reveals increased expression of glucose-dependent insulinotropic polypeptide following chronic clozapine treatment: role in atypical antipsychotic drug-induced adverse metabolic effects  Academic Article