Genomics Concept

subject area of

• A Genomic Score Prognostic of Outcome in Trauma Patients  Journal Articles
• A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals  Journal Articles
• A coding and non-coding transcriptomic perspective on the genomics of human metabolic disease  Journal Articles
• A community resource for paired genomic and metabolomic data mining  Journal Articles
• A comprehensive genomic history of extinct and living elephants  Journal Articles
• A comprehensive genomic reporting structure for communicating all clinically significant primary and secondary findings  Journal Articles
• A high‐quality carabid genome assembly provides insights into beetle genome evolution and cold adaptation  Journal Articles
• A machine learning approach to radiogenomics of breast cancer: a study of 922 subjects and 529 DCE-MRI features  Journal Articles
• A model for the return and referral of all clinically significant secondary findings of genomic sequencing  Journal Articles
• A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus gen. nov., Cytobacillus gen. nov., Mesobacillus gen. nov., Neobacillus gen. nov., Metabacillus gen. nov. and Alkalihalobacillus gen. nov.  Journal Articles
• A phylogenomic framework and timescale for comparative studies of tunicates  Journal Articles
• A pipeline for the de novo assembly of the Themira biloba (Sepsidae: Diptera) transcriptome using a multiple k-mer length approach  Journal Articles
• A robust platform for chemical genomics in bacterial systems  Journal Articles
• A shotgun lipidomics approach in Sinorhizobium meliloti as a tool in functional genomics  Journal Articles
• A target based approach identifies genomic predictors of breast cancer patient response to chemotherapy  Journal Articles
• ANISEED 2015: a digital framework for the comparative developmental biology of ascidians  Journal Articles
• Additional molecular support for the new chordate phylogeny  Journal Articles
• Advances in Genomic Analysis of Stroke  Journal Articles
• Aerobic proteobacterial methylotrophs in Movile Cave: genomic and metagenomic analyses  Journal Articles
• An Integrated Approach to Functional Genomics: Construction of a Novel Reporter Gene Fusion Library forSinorhizobium meliloti  Journal Articles
• Analysis of the genomic landscapes of Barbadian and Nigerian women with triple negative breast cancer  Journal Articles
• Ancient Whole Genome Enrichment Using Baits Built from Modern DNA  Journal Articles
• Ancient human genomics: the methodology behind reconstructing evolutionary pathways  Journal Articles
• AnnoTree: visualization and exploration of a functionally annotated microbial tree of life  Journal Articles
• AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods  Journal Articles
• Antimicrobial resistance surveillance in the genomic age  Journal Articles
• Assessment of Immune Checkpoint Inhibitors and Genomic Alterations by Body Mass Index in Advanced Renal Cell Carcinoma  Journal Articles
• Bacteriophage ZCSE2 is a Potent Antimicrobial against Salmonella enterica Serovars: Ultrastructure, Genomics and Efficacy  Journal Articles
• Canadian Open Genetics Repository (COGR): a unified clinical genomics database as a community resource for standardising and sharing genetic interpretations  Journal Articles
• Cancer phenomics: RET and PTEN as illustrative models  Journal Articles
• Causes and Consequences of Genetic Background Effects Illuminated by Integrative Genomic Analysis  Journal Articles
• Challenges and practical solutions for managing secondary genomic findings in primary care  Journal Articles
• Challenges of Conducting Value Assessment for Comprehensive Genomic Profiling  Journal Articles
• Characterization and genomic analysis of a diesel-degrading bacterium, Acinetobacter calcoaceticus CA16, isolated from Canadian soil  Journal Articles
• Characterization of metastatic urothelial carcinoma via comprehensive genomic profiling of circulating tumor DNA  Journal Articles
• Chemical Genomic Approaches to Study Model Microbes  Journal Articles
• Chemical genomics in Escherichia coli identifies an inhibitor of bacterial lipoprotein targeting  Journal Articles
• Chemical genomics reveals mechanistic hypotheses for uncharacterized bioactive molecules in bacteria  Journal Articles
• Chemical genomics reveals targetable programs of human cancers rooted in pluripotency  Journal Articles
• Chitinase genes ( CHIA s) provide genomic footprints of a post-Cretaceous dietary radiation in placental mammals  Journal Articles
• Clinical Utility of Genomic Sequencing for Hereditary Cancer Syndromes: An Observational Cohort Study.  Journal Articles
• Clinical and Genomic Risk in Adjuvant Therapy for Breast Cancer  Journal Articles
• Clinical and Genomic Risk in Adjuvant Therapy for Breast Cancer.  Journal Articles
• Clinical and Genomic Risk in Adjuvant Therapy for Breast Cancer. Reply.  Journal Articles
• Cohort profile: genomic data for 26 622 individuals from the Canadian Longitudinal Study on Aging (CLSA)  Journal Articles
• Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection  Journal Articles
• Comparative Genomic and Metagenomic Investigations of the Corynebacterium tuberculostearicum Species Complex Reveals Potential Mechanisms Underlying Associations To Skin Health and Disease  Journal Articles
• Comparative Genomics of Canadian Epidemic Lineages of Methicillin-Resistant Staphylococcus aureus  Journal Articles
• Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness  Journal Articles
• Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants  Journal Articles
• Comparing the performance of linear and nonlinear principal components in the context of high-dimensional genomic data integration  Journal Articles
• Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths  Journal Articles
• Complete genomic landscape of a recurring sporadic parathyroid carcinoma  Journal Articles
• Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools  Journal Articles
• Comprehensive whole-genome sequence analyses provide insights into the genomic architecture of cerebral palsy  Journal Articles
• Context matters: assessing the impacts of genomic background and ecology on microbial biosynthetic gene cluster evolution.  Journal Articles
• DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products  Journal Articles
• Demystifying phenotypes: The comparative genomics of evo-devo  Journal Articles
• Dereplication of Natural Product Antifungals via Liquid Chromatography-Tandem Mass Spectrometry and Chemical Genomics.  Journal Articles
• Detection of Large Genomic RNA via DNAzyme‐Mediated RNA Cleavage and Rolling Circle Amplification: SARS‐CoV‐2 as a Model  Journal Articles
• Determining the mode of action of bioactive compounds  Journal Articles
• Diagnostic potential of genomic blood biomarkers of pulmonary fibrosis in a prospective cohort.  Journal Articles
• Direct-to-consumer genetic testing: letting the genie out of the bottle?  Journal Articles
• Discovery of novel bacterial toxins by genomics and computational biology  Journal Articles
• Draft genome of the globally widespread and invasive Argentine ant ( Linepithema humile )  Journal Articles
• Draft genome of the red harvester ant Pogonomyrmex barbatus  Journal Articles
• Ecological Genomics of Marine Roseobacters  Journal Articles
• Enabling the genomic revolution in Africa  Journal Articles
• Enlightening human B‐cell diversity  Journal Articles
• Evaluation of a decision aid for incidental genomic results, the Genomics ADvISER: protocol for a mixed methods randomised controlled trial  Journal Articles
• Evidence of causal effect of major depression on alcohol dependence: findings from the psychiatric genomics consortium  Journal Articles
• Evidence synthesis and guideline development in genomic medicine: current status and future prospects  Journal Articles
• Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selection of Expanded Gene Content and Coordinated Gene Expression  Journal Articles
• Evolution of Proteasome Regulators in Eukaryotes  Journal Articles
• Evolution of genes and genomes on the Drosophila phylogeny  Journal Articles
• Examination of Prokaryotic Multipartite Genome Evolution through Experimental Genome Reduction  Journal Articles
• Expanding the soil antibiotic resistome: exploring environmental diversity  Journal Articles
• FUNCTIONAL GENOMICS OF ADAPTATION TO HYPOXIC COLD-STRESS IN HIGH-ALTITUDE DEER MICE: TRANSCRIPTOMIC PLASTICITY AND THERMOGENIC PERFORMANCE  Journal Articles
• Falling prices and unfair competition in consumer genomics  Journal Articles
• Filtering Genes for Cluster and Network Analysis  Journal Articles
• From Barcodes to Biomes: Special Issues from the 6th International Barcode of Life Conference  Journal Articles
• Functional Profiling and Evolutionary Analysis of a Marine Microalgal Virus Pangenome  Journal Articles
• Functional dissection and assembly of a small, newly evolved, W chromosome-specific genomic region of the African clawed frog Xenopus laevis  Journal Articles
• Functional genomic landscape of cancer-intrinsic evasion of killing by T cells  Journal Articles
• Fungal species concepts in the genomics era  Journal Articles
• Genetic Determinants of Warfarin Maintenance Dose and Time in Therapeutic Treatment Range: A RE-LY Genomics Substudy  Journal Articles
• Genetic Susceptibility to West Nile Virus and Dengue  Journal Articles
• Genetics and Genomics of Pulmonary Fibrosis: Charting the Molecular Landscape and Shaping Precision Medicine  Journal Articles
• Gene‐targeted therapies: Towards equitable development, diagnosis, and access  Journal Articles
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria  Journal Articles
• Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A  Journal Articles
• Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes  Journal Articles
• Genome-Scale Phylogeny and the Detection of Systematic Biases  Journal Articles
• Genome-wide detection of tandem DNA repeats that are expanded in autism  Journal Articles
• Genome-wide expression profiling of maize in response to individual and combined water and nitrogen stresses  Journal Articles
• Genome-wide lentiviral shRNA screen identifies serine/arginine-rich splicing factor 2 as a determinant of oncolytic virus activity in breast cancer cells  Journal Articles
• Genomes of the Symbiotic Nitrogen-Fixing Bacteria of Legumes  Journal Articles
• Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)  Journal Articles
• Genomes within genomes: nested symbiosis and its implications for plant evolution  Journal Articles
• Genomic Analyses Identify Novel Molecular Signatures Specific for the Caenorhabditis and other Nematode Taxa Providing Novel Means for Genetic and Biochemical Studies  Journal Articles
• Genomic Analyses of a Fungemia Outbreak Caused by Lodderomyces elongisporus in a Neonatal Intensive Care Unit in Delhi, India  Journal Articles
• Genomic Characterization of Circulating Dengue Virus, Ethiopia, 2022–2023  Journal Articles
• Genomic Classifier Performance in Intermediate-Risk Prostate Cancer: Results From NRG Oncology/RTOG 0126 Randomized Phase 3 Trial  Journal Articles
• Genomic Consequences of Background Effects onscallopedMutant Expressivity in the Wing ofDrosophila melanogaster  Journal Articles
• Genomic Loss and Epigenetic Silencing of the FOSL1 Tumor Suppressor Gene in Radiation-induced Neoplastic Transformation of Human CGL1 Cells Alters the Tumorigenic Phenotype In Vitro and In Vivo  Journal Articles
• Genomic Minimalism in the Early Diverging Intestinal Parasite Giardia lamblia  Journal Articles
• Genomic and Clinical Correlates of Adrenocortical Carcinoma in an Adult Patient with Li-Fraumeni Syndrome: A Case Report  Journal Articles
• Genomic approaches to bleeding disorders  Conferences
• Genomic architecture of autism from comprehensive whole-genome sequence annotation  Journal Articles
• Genomic atlas of the plasma metabolome prioritizes metabolites implicated in human diseases  Journal Articles
• Genomic basis of delayed reward discounting  Journal Articles
• Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining  Journal Articles
• Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenzae isolates associated with paediatric otitis media and upper respiratory infection  Journal Articles
• Genomic hallmarks of localized, non-indolent prostate cancer  Journal Articles
• Genomic inversions in Escherichia coli alter gene expression and are associated with nucleoid protein binding sites  Journal Articles
• Genomic investigations of unexplained acute hepatitis in children  Journal Articles
• Genomic resources for identification of the minimal N₂‐fixing symbiotic genome  Journal Articles
• Genomic responses in mouse models poorly mimic human inflammatory diseases  Journal Articles
• Genomics and epigenomics in pediatric oncology and clinical laboratory genetics  Journal Articles
• Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria  Journal Articles
• Genotypic and Phenotypic Analyses of Two “Isogenic” Strains of the Human Fungal Pathogen Cryptococcus neoformans var. neoformans  Journal Articles
• Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis  Journal Articles
• Glycopeptide antibiotic discovery in the genomic era  Chapters
• Heterologous expression-facilitated natural products’ discovery in actinomycetes  Journal Articles
• Heterotachy and long-branch attraction in phylogenetics  Journal Articles
• Hierarchical convolutional neural networks for segmentation of breast tumors in MRI with application to radiogenomics  Journal Articles
• INVITED REVIEW: Microbial ecology in the age of genomics and metagenomics: concepts, tools, and recent advances  Journal Articles
• Identification of a Novel Hepatitis C Virus Genotype From Punjab, India: Expanding Classification of Hepatitis C Virus Into 8 Genotypes  Journal Articles
• Identification of patient demographic, clinical, and SARS-CoV-2 genomic factors associated with severe COVID-19 using supervised machine learning: a retrospective multicenter study.  Journal Articles
• Identification of the Regulatory Logic Controlling Salmonella Pathoadaptation by the SsrA-SsrB Two-Component System  Journal Articles
• IgA and IgG antineutrophil cytoplasmic antibody engagement of Fc receptor genetic variants influences granulomatosis with polyangiitis  Journal Articles
• Impact of genomics on the understanding of microbial evolution and classification: the importance of Darwin's views on classification  Journal Articles
• Important research questions in allergy and related diseases: nonallergic rhinitis: a GA²LEN paper  Journal Articles
• Improvements in the HbVar database of human hemoglobin variants and thalassemia mutations for population and sequence variation studies  Journal Articles
• Infectious salmon anaemia virus (ISAV) isolates induce distinct gene expression responses in the Atlantic salmon (Salmo salar) macrophage/dendritic-like cell line TO, assessed using genomic techniques  Journal Articles
• Interferon-Mediated Immunopathological Events Are Associated with Atypical Innate and Adaptive Immune Responses in Patients with Severe Acute Respiratory Syndrome  Journal Articles
• Intertumoral Heterogeneity within Medulloblastoma Subgroups  Journal Articles
• Invited Commentary: Consolidating Data Harmonization--How to Obtain Quality and Applicability?  Journal Articles
• IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1.  Journal Articles
• Kastor: a reference-based comparative approach for assessment and correction of gene-fragmenting errors in long-read assemblies of small genomes.  Journal Articles
• Les datations moléculaires à l’heure de la génomique  Journal Articles
• Lessons of the month: A breathless severe asthmatic in the genomic era: Occam's razor or Hickam's dictum?  Journal Articles
• Limited genomic consequences of hybridization between two African clawed frogs, Xenopus gilli and X. laevis (Anura: Pipidae)  Journal Articles
• Longitudinal characterization of impulsivity phenotypes boosts signal for genomic correlates and heritability.  Journal Articles
• Low copy number of the salivary amylase gene predisposes to obesity  Journal Articles
• Male Sex Drive and the Maintenance of Sex: Evidence from Drosophila  Journal Articles
• Metagenomics to Paleogenomics: Large-Scale Sequencing of Mammoth DNA  Journal Articles
• Microbial systematics in the post-genomics era  Journal Articles
• Mitochondria and Cancer: Past, Present, and Future  Journal Articles
• Mitochondrial Disease Sequence Data Resource (MSeqDR): A global grass-roots consortium to facilitate deposition, curation, annotation, and integrated analysis of genomic data for the mitochondrial disease clinical and research communities  Journal Articles
• Mitonuclear interactions and introgression genomics of macaque monkeys ( Macaca ) highlight the influence of behaviour on genome evolution  Journal Articles
• Molecular Genetic Analysis of the Idd4 Locus Implicates the IFN Response in Type 1 Diabetes Susceptibility in Nonobese Diabetic Mice  Journal Articles
• Molecular classification of idiopathic pulmonary fibrosis: Personalized medicine, genetics and biomarkers  Journal Articles
• Molecular subgroups of atypical teratoid rhabdoid tumours in children: an integrated genomic and clinicopathological analysis  Journal Articles
• Much ado about omics: welcome to ‘the permutome’  Journal Articles
• Naked but Not Hairless: The Pitfalls of Analyses of Molecular Adaptation Based on Few Genome Sequence Comparisons  Journal Articles
• Networks of human milk microbiota are associated with host genomics, childhood asthma, and allergic sensitization.  Journal Articles
• New Advances in Separation Science for Metabolomics: Resolving Chemical Diversity in a Post-Genomic Era  Journal Articles
• New insights into Xenopus sex chromosome genomics from the Marsabit clawed frog X. borealis  Journal Articles
• Novel approaches to discovery of antibacterial agents  Journal Articles
• Omics Underpins Novel Clues on VDR Chemoprevention Target in Breast Cancer  Journal Articles
• Open-Source High-Throughput Phenomics of Bacterial Promoter-Reporter Strains  Journal Articles
• Opportunistic genomic screening has clinical utility: An interventional cohort study.  Journal Articles
• Opportunities for natural products in 21^st century antibiotic discovery  Journal Articles
• Origin and evolution of gene families in Bacteria and Archaea  Journal Articles
• Origins and evolution of biological novelty  Journal Articles
• OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals  Journal Articles
• Overexpression of MUC1 and Genomic Alterations in Its Network Associate with Prostate Cancer Progression  Journal Articles
• Pan-urologic cancer genomic subtypes that transcend tissue of origin  Journal Articles
• Phenomics: expanding the role of clinical evaluation in genomic studies.  Journal Articles
• Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont  Journal Articles
• Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation  Journal Articles
• Phylogenomic and comparative genomic analyses of Leuconostocaceae species: identification of molecular signatures specific for the genera Leuconostoc, Fructobacillus and Oenococcus and proposal for a novel genus Periweissella gen. nov.  Journal Articles
• Phylogenomic and comparative genomic analyses of species of the family Pseudomonadaceae: Proposals for the genera Halopseudomonas gen. nov. and Atopomonas gen. nov., merger of the genus Oblitimonas with the genus Thiopseudomonas, and transfer of some misclassified species of the genus Pseudomonas into other genera  Journal Articles
• Phylogenomic and comparative genomic studies robustly demarcate two distinct clades of Pseudomonas aeruginosa strains: proposal to transfer the strains from an outlier clade to a novel species Pseudomonas paraeruginosa sp. nov.  Journal Articles
• Phylogenomics and comparative genomic studies delineate six main clades within the family Enterobacteriaceae and support the reclassification of several polyphyletic members of the family  Journal Articles
• Phylogenomics and molecular signatures for the order Neisseriales: proposal for division of the order Neisseriales into the emended family Neisseriaceae and Chromobacteriaceae fam. nov.  Journal Articles
• Phylogenomics and protein signatures elucidating the evolutionary relationships among the Gammaproteobacteria  Journal Articles
• Phylogenomics and the reconstruction of the tree of life  Journal Articles
• Phylogenomics: the beginning of incongruence?  Journal Articles
• Physiological and genomic evidence that selection on the transcription factor Epas1 has altered cardiovascular function in high-altitude deer mice  Journal Articles
• Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections  Journal Articles
• Population genomics and subgenome evolution of the allotetraploid frog Xenopus laevis in southern Africa  Journal Articles
• Precision oncology using ex vivo technology: a step towards individualised cancer care?  Journal Articles
• Predicting novel disease mutations in the cardiac sodium channel  Journal Articles
• Primary care providers' experiences with and perceptions of personalized genomic medicine.  Journal Articles
• Prostate Cancer Transcriptomic Regulation by the Interplay of Germline Risk Alleles, Somatic Mutations, and 3D Genomic Architecture  Journal Articles
• Putting the Genome in Context: Gene-Environment Interactions in Type 2 Diabetes  Journal Articles
• Pygenprop: a Python library for programmatic exploration and comparison of organism genome properties  Journal Articles
• Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis  Journal Articles
• Regulatory changes contribute to the adaptive enhancement of thermogenic capacity in high-altitude deer mice  Journal Articles
• Reply to Just the facts, please  Journal Articles
• Response to Brinkmann et al. “Re-assembly of 19th century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the United States”  Journal Articles
• Return of Results Policies for Genomic Research: Current Practices and the Hearts in Rhythm Organization (HiRO) Approach  Journal Articles
• Return of genetic and genomic research findings: experience of a pediatric biorepository  Journal Articles
• Robust demarcation of 17 distinct Bacillus species clades, proposed as novel Bacillaceae genera, by phylogenomics and comparative genomic analyses: description of Robertmurraya kyonggiensis sp. nov. and proposal for an emended genus Bacillus limiting it only to the members of the Subtilis and Cereus clades of species  Journal Articles
• Robust demarcation of fourteen different species groups within the genus Streptococcus based on genome-based phylogenies and molecular signatures  Journal Articles
• SAGE: String-overlap Assembly of GEnomes  Journal Articles
• SHRiMP2: Sensitive yet Practical Short Read Mapping  Journal Articles
• SNP Panel and Genomic Sex Identification in Atlantic Halibut (Hippoglossus hippoglossus)  Journal Articles
• Seeing green bacteria in a new light: genomics-enabled studies of the photosynthetic apparatus in green sulfur bacteria and filamentous anoxygenic phototrophic bacteria  Journal Articles
• Selvamicin, an atypical antifungal polyene from two alternative genomic contexts  Journal Articles
• Shotgun Mitogenomics Provides a Reference Phylogenetic Framework and Timescale for Living Xenarthrans  Journal Articles
• Single-Species Microarrays and Comparative Transcriptomics  Journal Articles
• Small non-coding RNAs in Streptomyces coelicolor  Journal Articles
• Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples.  Journal Articles
• Sparse Canonical Correlation Analysis with Application to Genomic Data Integration  Journal Articles
• Strategic Targeting of Essential Host-pathogen Interactions in Chlamydial Disease  Journal Articles
• Strategies for target identification of antimicrobial natural products  Journal Articles
• Stroke Genetics, Genomics, and Precision Medicine  Journal Articles
• Subgroup-specific structural variation across 1,000 medulloblastoma genomes  Journal Articles
• Systems-Level Chemical Biology to Accelerate Antibiotic Drug Discovery  Journal Articles
• Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease  Journal Articles
• Targeted amplification-based whole genome sequencing of Monkeypox virus in clinical specimens  Journal Articles
• Targeted genomic landscape of metastases compared to primary tumours in clear cell metastatic renal cell carcinoma  Journal Articles
• Targeted metabolite and transcript profiling for elucidating enzyme function: isolation of novel N‐methyltransferases from three benzylisoquinoline alkaloid‐producing species  Journal Articles
• The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.  Journal Articles
• The Caribou (Rangifer tarandus) Genome  Journal Articles
• The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information  Journal Articles
• The Divided Bacterial Genome: Structure, Function, and Evolution  Journal Articles
• The Integrated Genomic Landscape of Thymic Epithelial Tumors  Journal Articles
• The Location of Substitutions and Bacterial Genome Arrangements  Journal Articles
• The LuxS family of bacterial autoinducers: biosynthesis of a novel quorum‐sensing signal molecule  Journal Articles
• The Recovery, Interpretation and Use of Ancient Pathogen Genomes  Journal Articles
• The antimicrobial potential of Streptomyces from insect microbiomes  Journal Articles
• The future of molecular approaches to inflammatory bowel disease.  Journal Articles
• The genomic evolutionary dynamics and global circulation patterns of respiratory syncytial virus  Journal Articles
• The genomics of heart failure: design and rationale of the HERMES consortium  Journal Articles
• The post-genomic era: workshop on chromatin immunoprecipitation-related techniques  Journal Articles
• The role of clinical response to treatment in determining pathogenicity of genomic variants  Journal Articles
• Thermal Injury Activates the eEF2K‐Dependent eEF2 Pathway in Pediatric Patients  Journal Articles
• Thousands of small, novel genes predicted in global phage genomes  Journal Articles
• Transfusion Medicine in the Era of Genomics and Proteomics  Journal Articles
• Truncating Mutations in UBAP1 Cause Hereditary Spastic Paraplegia  Journal Articles
• Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny  Journal Articles
• Unsupervised statistical clustering of environmental shotgun sequences  Journal Articles
• Untapped "-omics": the microbial metagenome, estrobolome, and their influence on the development of breast cancer and response to treatment.  Journal Articles
• Use of genetic and chemical synthetic lethality as probes of complexity in bacterial cell systems  Journal Articles
• Validation of a 22-Gene Genomic Classifier in Patients With Recurrent Prostate Cancer  Journal Articles
• What Do Genomics, Float Pools and Cardiac Surgery Have in Common? Innovating Nurses.  Journal Articles
• Widening the lens of actionability: A qualitative study of primary care providers’ views and experiences of managing secondary genomic findings  Journal Articles
• Xenopus fraseri: Mr. Fraser, where did your frog come from?  Journal Articles
• Yale Center for Clinical Investigation: Leveraging Industry Partnerships and Research Cores  Journal Articles
• zol and fai: large-scale targeted detection and evolutionary investigation of gene clusters.  Journal Articles
• “I don’t need any more unknowns hanging over my head”: Views of patients with cancer on variants of uncertain significance and low/moderate risk results from genomic sequencing  Journal Articles