Gastrointestinal Microbiome Concept

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• Saccharomyces boulardii CNCM I‐745 modulates the microbiota–gut–brain axis in a humanized mouse model of Irritable Bowel Syndrome  Academic Article
• β2-1 Fructan supplementation alters host immune responses in a manner consistent with increased exposure to microbial components: results from a double-blinded, randomised, cross-over study in healthy adults  Academic Article
• A comparison of intestinal microbiota in a population of low-risk infants exposed and not exposed to intrapartum antibiotics: The Baby & Microbiota of the Intestine cohort study protocol  Academic Article
• A rich meconium metabolome in human infants is associated with early-life gut microbiota composition and reduced allergic sensitization  Academic Article
• AGA Clinical Practice Guidelines on the Role of Probiotics in the Management of Gastrointestinal Disorders  Academic Article
• AGA Technical Review on the Role of Probiotics in the Management of Gastrointestinal Disorders  Academic Article
• Acetylcholine-producing T cells in the intestine regulate antimicrobial peptide expression and microbial diversity  Academic Article
• Active thrombin produced by the intestinal epithelium controls mucosal biofilms  Academic Article
• Altered Gut Microbiome Composition and Function Are Associated With Gut Barrier Dysfunction in Healthy Relatives of Patients With Crohn’s Disease  Academic Article
• Antibiotic prescribing and associated diarrhoea: a prospective cohort study of care home residents  Academic Article
• Antibiotics and the nervous system: More than just the microbes?  Academic Article
• Antioxidant Supplements and Gastrointestinal Diseases: A Critical Appraisal  Academic Article
• Application of metabolomics to the study of irritable bowel syndrome  Academic Article
• Aryl hydrocarbon receptor ligand production by the gut microbiota is decreased in celiac disease leading to intestinal inflammation  Academic Article
• Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life  Academic Article
• Association of gut microbiome with fasting triglycerides, fasting insulin and obesity status in Mexican children  Academic Article
• Bacterial–fungal interactions in the neonatal gut influence asthma outcomes later in life  Academic Article
• Bacteroides-dominant gut microbiome of late infancy is associated with enhanced neurodevelopment  Academic Article
• Bifidobacterium infantis NLS Super Strain Reduces the Expression of α-Defensin-5, a Marker of Innate Immunity, in the Mucosa of Active Celiac Disease Patients  Academic Article
• Biogeographic Variation and Functional Pathways of the Gut Microbiota in Celiac Disease  Academic Article
• Branched-chain volatile fatty acids and folic acid accelerated the growth of Holstein dairy calves by stimulating nutrient digestion and rumen metabolism  Academic Article
• Breastmilk Feeding Practices Are Associated with the Co-Occurrence of Bacteria in Mothers’ Milk and the Infant Gut: the CHILD Cohort Study  Academic Article
• Cabbage and fermented vegetables: From death rate heterogeneity in countries to candidates for mitigation strategies of severe COVID‐19  Academic Article
• Capturing the Resistome: a Targeted Capture Method To Reveal Antibiotic Resistance Determinants in Metagenomes  Academic Article
• Capturing the diversity of the human gut microbiota through culture-enriched molecular profiling  Academic Article
• Cecal motility and the impact of Lactobacillus in feather pecking laying hens  Academic Article
• Celiac disease: should we care about microbes?  Academic Article
• Changes in gut microbiota during development of compulsive checking and locomotor sensitization induced by chronic treatment with the dopamine agonist quinpirole  Academic Article
• Changes in the gut microbiome associated with infliximab in patients with bipolar disorder  Academic Article
• Characterizing the gut microbiota in adults with bipolar disorder: a pilot study  Academic Article
• Clostridioides difficile Colonization Is Differentially Associated With Gut Microbiome Profiles by Infant Feeding Modality at 3–4 Months of Age  Academic Article
• Co-factors, Microbes, and Immunogenetics in Celiac Disease to Guide Novel Approaches for Diagnosis and Treatment  Academic Article
• Commensal microbiota induces colonic barrier structure and functions that contribute to homeostasis  Academic Article
• Common Oral Medications Lead to Prophage Induction in Bacterial Isolates from the Human Gut  Academic Article
• Common ground: shared risk factors for type 1 diabetes and celiac disease  Academic Article
• Composition and Associations of the Infant Gut Fungal Microbiota with Environmental Factors and Childhood Allergic Outcomes  Academic Article
• Contextual risk factors impacting the colonization and development of the intestinal microbiota: Implications for children in low- and middle-income countries  Academic Article
• Decoding Microbiome Research for Clinical Psychiatry  Academic Article
• Decreasing antibiotic use, the gut microbiota, and asthma incidence in children: evidence from population-based and prospective cohort studies  Academic Article
• Development of the Microbiota and Associations With Birth Mode, Diet, and Atopic Disorders in a Longitudinal Analysis of Stool Samples, Collected From Infancy Through Early Childhood  Academic Article
• Diet and depression: exploring the biological mechanisms of action  Academic Article
• Differences in Gut Microbiota in Patients With vs Without Inflammatory Bowel Diseases: A Systematic Review  Academic Article
• Differences in cecal microbiome of selected high and low feather-pecking laying hens  Academic Article
• Different Th17 immunity in gut, liver, and adipose tissues during obesity: the role of diet, genetics, and microbes  Academic Article
• Disruptive physiology: olfaction and the microbiome-gut-brain axis  Academic Article
• Does over a century of aerobic phage work provide a solid framework for the study of phages in the gut?  Academic Article
• Duodenal bacterial proteolytic activity determines sensitivity to dietary antigen through protease-activated receptor-2  Academic Article
• Early infancy microbial and metabolic alterations affect risk of childhood asthma  Academic Article
• Early‐life cytomegalovirus infection is associated with gut microbiota perturbations and increased risk of atopy  Academic Article
• Editorial: metabolomic biomarkers for colorectal adenocarcinoma and in the differentiation between irritable bowel syndrome and ulcerative colitis in clinical remission - confounded by the gut microbiome? Authors’ reply  Academic Article
• Effect of Exclusive Enteral Nutrition and Corticosteroid Induction Therapy on the Gut Microbiota of Pediatric Patients with Inflammatory Bowel Disease  Academic Article
• Effect of Lactobacillus casei Shirota supplementation on trimethylamine-N-oxide levels in patients with metabolic syndrome: An open-label, randomized study  Academic Article
• Effect ofBifidobacterium infantisNLS super strain in symptomatic coeliac disease patients on long-term gluten-free diet – an exploratory study  Academic Article
• Effects of dietary supplementation of rumen-protected folic acid on rumen fermentation, degradability and excretion of urinary purine derivatives in growing steers  Academic Article
• Effects of folic acid on growth performance, ruminal fermentation, nutrient digestibility and urinary excretion of purine derivatives in post-weaned dairy calves  Academic Article
• Effects of microbiota-driven therapy on inflammatory responses in elderly individuals: A systematic review and meta-analysis  Academic Article
• Effects of rumen-protected folic acid and betaine supplementation on growth performance, nutrient digestion, rumen fermentation and blood metabolites in Angus bulls  Academic Article
• Effects of rumen‐protected folic acid and rumen‐protected sodium selenite supplementation on lactation performance, nutrient digestion, ruminal fermentation and blood metabolites in dairy cows  Academic Article
• Effects of soybean oil and dietary copper levels on nutrient digestion, ruminal fermentation, enzyme activity, microflora and microbial protein synthesis in dairy bulls  Academic Article
• Endocytosis of commensal antigens by intestinal epithelial cells regulates mucosal T cell homeostasis  Academic Article
• Endometriosis and the microbiome: a systematic review  Academic Article
• Ethnic and diet-related differences in the healthy infant microbiome  Academic Article
• Ethnicity Associations With Food Sensitization Are Mediated by Gut Microbiota Development in the First Year of Life  Academic Article
• Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System  Academic Article
• Exposure to household furry pets influences the gut microbiota of infants at 3–4 months following various birth scenarios  Academic Article
• FODMAPs alter symptoms and the metabolome of patients with IBS: a randomised controlled trial  Academic Article
• FUT2 genotype and secretory status are not associated with fecal microbial composition and inferred function in healthy subjects  Academic Article
• Fasting increases microbiome-based colonization resistance and reduces host inflammatory responses during an enteric bacterial infection  Academic Article
• Fecal microbial transplant for the treatment of pediatric inflammatory bowel disease  Academic Article
• Fecal transplant from resveratrol-fed donors improves glycaemia and cardiovascular features of the metabolic syndrome in mice  Academic Article
• From Birth to Overweight and Atopic Disease: Multiple and Common Pathways of the Infant Gut Microbiome  Academic Article
• Fungal DNA barcoding  Academic Article
• Glucose alters the symbiotic relationships between gut microbiota and host physiology  Academic Article
• Gluten-degrading bacteria are present in the human small intestine of healthy volunteers and celiac patients  Academic Article
• Gut Microbiome Patterns Associated With Treatment Response in Patients With Major Depressive Disorder: Changements du microbiote intestinal associés à la réponse au traitement chez des patients souffrant de trouble dépressif majeur  Academic Article
• Gut Microbiome and Behavior  Chapter
• Gut Microbiota and Brain Function: An Evolving Field in Neuroscience: Table 1.  Academic Article
• Gut Microbiota in Patients With Irritable Bowel Syndrome—A Systematic Review  Academic Article
• Gut Microbiota, Bacterial Translocation, and Interactions with Diet: Pathophysiological Links between Major Depressive Disorder and Non-Communicable Medical Comorbidities  Academic Article
• Gut bacteria interact directly with colonic mast cells in a humanized mouse model of IBS  Academic Article
• Gut microbiota impairs insulin clearance in obese mice  Academic Article
• Gut microbiota-based vaccination engages innate immunity to improve blood glucose control in obese mice  Academic Article
• High Fat-High Fructose Diet-Induced Changes in the Gut Microbiota Associated with Dyslipidemia in Syrian Hamsters  Academic Article
• High salt diet exacerbates colitis in mice by decreasing Lactobacillus levels and butyrate production  Academic Article
• High-fructose feeding suppresses cold-stimulated brown adipose tissue glucose uptake independently of changes in thermogenesis and the gut microbiome  Academic Article
• High-intensity exercise training increases the diversity and metabolic capacity of the mouse distal gut microbiota during diet-induced obesity  Academic Article
• High‐fat diet intake modulates maternal intestinal adaptations to pregnancy and results in placental hypoxia, as well as altered fetal gut barrier proteins and immune markers  Academic Article
• Histamine production by the gut microbiota induces visceral hyperalgesia through histamine 4 receptor signaling in mice  Academic Article
• Host immune interactions in chronic inflammatory gastrointestinal conditions  Academic Article
• Host–Microbe Interplay in the Cardiometabolic Benefits of Dietary Polyphenols  Academic Article
• How do probiotics and prebiotics function at distant sites?  Academic Article
• Human symbionts inject and neutralize antibacterial toxins to persist in the gut  Academic Article
• IMAGINE Network’s Mind And Gut Interactions Cohort (MAGIC) Study: a protocol for a prospective observational multicentre cohort study in inflammatory bowel disease and irritable bowel syndrome  Academic Article
• Immune Stimulation Using a Gut Microbe-Based Immunotherapy Reduces Disease Pathology and Improves Barrier Function in Ulcerative Colitis  Academic Article
• Impact of CFTR modulation with Ivacaftor on Gut Microbiota and Intestinal Inflammation  Academic Article
• Impact of maternal intrapartum antibiotics, method of birth and breastfeeding on gut microbiota during the first year of life: a prospective cohort study  Academic Article
• Improved Glucose Homeostasis in Obese Mice Treated With Resveratrol Is Associated With Alterations in the Gut Microbiome  Academic Article
• Increased prevalence of pathogenic bacteria in the gut microbiota of infants at risk of developing celiac disease: The PROFICEL study  Academic Article
• Infants’ First Solid Foods: Impact on Gut Microbiota Development in Two Intercontinental Cohorts  Academic Article
• Inflammation-related differences in mucosa-associated microbiota and intestinal barrier function in colonic Crohn’s disease  Academic Article
• Ingestion of Lactobacillus rhamnosus modulates chronic stress-induced feather pecking in chickens  Academic Article
• Integrative Physiology: At the Crossroads of Nutrition, Microbiota, Animal Physiology, and Human Health  Academic Article
• Intestinal Microbial Composition of Children in a Randomized Controlled Trial of Probiotics to Treat Acute Gastroenteritis  Academic Article
• Intestinal Microbiota Modulates Gluten-Induced Immunopathology in Humanized Mice  Academic Article
• Intrapartum antibiotics for GBS prophylaxis alter colonization patterns in the early infant gut microbiome of low risk infants  Academic Article
• Investigating colonization patterns of the infant gut microbiome during the introduction of solid food and weaning from breastmilk: A cohort study protocol  Academic Article
• Investigation of the Gut Microbiome in Patients with Schizophrenia and Clozapine-Induced Weight Gain: Protocol and Clinical Characteristics of First Patient Cohorts  Academic Article
• Is Anxiety Associated with the Gut Microbiota?  Academic Article
• Lactobacilli Degrade Wheat Amylase Trypsin Inhibitors to Reduce Intestinal Dysfunction Induced by Immunogenic Wheat Proteins  Academic Article
• Life‐long exercise training and inherited aerobic endurance capacity produce converging gut microbiome signatures in rodents  Academic Article
• Longitudinal body mass index trajectories at preschool age: children with rapid growth have differential composition of the gut microbiota in the first year of life  Academic Article
• Lost in Translation: The Gut Microbiota in Psychiatric Illness  Academic Article
• Lower brown adipose tissue activity is associated with non-alcoholic fatty liver disease but not changes in the gut microbiota  Academic Article
• Management ofHelicobacter pyloriinfection—the Maastricht V/Florence Consensus Report  Academic Article
• Maternal consumption of artificially sweetened beverages during pregnancy is associated with infant gut microbiota and metabolic modifications and increased infant body mass index  Academic Article
• Maternal depressive symptoms linked to reduced fecal Immunoglobulin A concentrations in infants  Academic Article
• Mechanisms Underlying Food-Triggered Symptoms in Disorders of Gut-Brain Interactions  Academic Article
• Mechanisms by which gut microorganisms influence food sensitivities  Academic Article
• Mediterranean-Like Dietary Pattern Associations With Gut Microbiome Composition and Subclinical Gastrointestinal Inflammation  Academic Article
• Metabolism of wheat proteins by intestinal microbes: Implications for wheat related disorders  Academic Article
• Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems  Academic Article
• Metformin-induced reductions in tumor growth involves modulation of the gut microbiome  Academic Article
• Microbe and host interaction in gastrointestinal homeostasis  Academic Article
• Microbe-Immune Crosstalk: Evidence That T Cells Influence the Development of the Brain Metabolome  Academic Article
• Microbial Regulation of Enteric Eosinophils and Its Impact on Tissue Remodeling and Th2 Immunity  Academic Article
• Microbiota and host determinants of behavioural phenotype in maternally separated mice  Academic Article
• Microbiota and the gut–brain axis  Academic Article
• Microbiota‐immune alterations in adolescents following early life adversity: A proof of concept study  Academic Article
• Micronutrients impact the gut microbiota and blood glucose  Academic Article
• Milk Fat Globule Membrane Supplementation in Formula Modulates the Neonatal Gut Microbiome and Normalizes Intestinal Development  Academic Article
• Mining the infant gut microbiota for therapeutic targets against atopic disease  Academic Article
• Modulating brain function with microbiota  Academic Article
• Modulation of Gut Microbiota Composition by Serotonin Signaling Influences Intestinal Immune Response and Susceptibility to Colitis  Academic Article
• Moody microbes or fecal phrenology: what do we know about the microbiota-gut-brain axis?  Academic Article
• Muc2 Mucin and Nonmucin Microbiota Confer Distinct Innate Host Defense in Disease Susceptibility and Colonic Injury  Academic Article
• Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment  Academic Article
• NOD2 in hepatocytes engages a liver-gut axis to protect against steatosis, fibrosis, and gut dysbiosis during fatty liver disease in mice  Academic Article
• Natural environments in the urban context and gut microbiota in infants  Academic Article
• Non-digestible oligosaccharides directly regulate host kinome to modulate host inflammatory responses without alterations in the gut microbiota  Academic Article
• Novel Fecal Biomarkers That Precede Clinical Diagnosis of Ulcerative Colitis  Academic Article
• Novel players in coeliac disease pathogenesis: role of the gut microbiota  Academic Article
• Nutritional Therapies and Their Influence on the Intestinal Microbiome in Pediatric Inflammatory Bowel Disease  Academic Article
• Nutritional profile of rodent diets impacts experimental reproducibility in microbiome preclinical research  Academic Article
• Obesity during pregnancy results in maternal intestinal inflammation, placental hypoxia, and alters fetal glucose metabolism at mid-gestation  Academic Article
• Optimization of metabolomics of defined in vitro gut microbial ecosystems  Academic Article
• Oral treatment with Lactobacillus rhamnosus attenuates behavioural deficits and immune changes in chronic social stress  Academic Article
• Perinatal programming of gut microbiota and immunity.  Academic Article
• Peripheral and central regulation of insulin by the intestine and microbiome  Academic Article
• Peripheral serotonin: cultivating companionship with gut microbiota in intestinal homeostasis  Academic Article
• Postnatal exposure to household disinfectants, infant gut microbiota and subsequent risk of overweight in children  Academic Article
• Pregnancy-related changes in the maternal gut microbiota are dependent upon the mother's periconceptional diet  Academic Article
• Probiotic supplementation can positively affect anxiety and depressive symptoms: a systematic review of randomized controlled trials  Academic Article
• Probiotics Reduce Mortality and Morbidity in Preterm, Low-Birth-Weight Infants: A Systematic Review and Network Meta-analysis of Randomized Trials  Academic Article
• Probiotics for Celiac Disease: A Systematic Review and Meta-Analysis of Randomized Controlled Trials  Academic Article
• Probiotics, prebiotics, synbiotics, and fecal microbiota transplantation in the treatment of behavioral symptoms of autism spectrum disorder: A systematic review  Academic Article
• Protocol for a randomised, placebo-controlled pilot study for assessing feasibility and efficacy of faecal microbiota transplantation in a paediatric ulcerative colitis population: PediFETCh trial  Academic Article
• Protocol for a systematic review on the role of the gut microbiome in paediatric neurological disorders  Academic Article
• Psoriasis Is Associated With Elevated Gut IL-1α and Intestinal Microbiome Alterations  Academic Article
• Psychological stress impairs IL22-driven protective gut mucosal immunity against colonising pathobionts  Academic Article
• Rainbow darter (Etheostoma caeruleum) from a river impacted by municipal wastewater effluents have altered gut content microbiomes  Academic Article
• Reduced genetic potential for butyrate fermentation in the gut microbiome of infants who develop allergic sensitization  Academic Article
• Results of the First Pilot Randomized Controlled Trial of Fecal Microbiota Transplant In Pediatric Ulcerative Colitis: Lessons, Limitations, and Future Prospects  Academic Article
• Role of intestinal microbiota and metabolites on gut homeostasis and human diseases  Academic Article
• Roles of Birth Mode and Infant Gut Microbiota in Intergenerational Transmission of Overweight and Obesity From Mother to Offspring  Academic Article
• Sex-specific impact of asthma during pregnancy on infant gut microbiota  Academic Article
• Shifting Climates, Foods, and Diseases: The Human Microbiome through Evolution  Academic Article
• Shifts in Lachnospira and Clostridium sp. in the 3-month stool microbiome are associated with preschool age asthma  Academic Article
• Spotlight: Probiotics Guidelines  Academic Article
• Starving the Gut: A Deficit of Butyrate in the Intestinal Ecosystem of Children With Intestinal Failure  Academic Article
• Structural & functional consequences of chronic psychosocial stress on the microbiome & host  Academic Article
• Study of duodenal bacterial communities by 16S rRNA gene analysis in adults with active celiac disease vs non-celiac disease controls  Academic Article
• Systematic Review and Meta-analysis  Academic Article
• Systematic review with meta-analysis: the efficacy of prebiotics, probiotics, synbiotics and antibiotics in irritable bowel syndrome  Academic Article
• TLR2 Plays a Pivotal Role in Mediating Mucosal Serotonin Production in the Gut  Academic Article
• The Esophageal and Gastric Microbiome in Health and Disease  Academic Article
• The Gut Microbiota and Unhealthy Aging: Disentangling Cause from Consequence  Academic Article
• The Gut Microbiota as a Mediator of Metabolic Benefits after Bariatric Surgery  Academic Article
• The Human Microbiota in Multiple Myeloma and Proteasome Inhibitors  Academic Article
• The Intestinal Microbiota in the Irritable Bowel Syndrome  Academic Article
• The effect of interventions targeting gut microbiota on depressive symptoms: a systematic review and meta-analysis  Academic Article
• The gut content microbiome of wild-caught rainbow darter is altered during laboratory acclimation  Academic Article
• The gut microbiome and inflammation in obsessive‐compulsive disorder patients compared to age‐ and sex‐matched controls: a pilot study  Academic Article
• The gut microbiome in psychiatry: A primer for clinicians  Academic Article
• The gut microbiome may influence post-prandial nitrogen handling in an elasmobranch, the Pacific spiny dogfish (Squalus suckleyi)  Academic Article
• The gut microbiome regulates host glucose homeostasis via peripheral serotonin  Academic Article
• The gut microbiome restores intrinsic and extrinsic nerve function in germ-free mice accompanied by changes in calbindin  Academic Article
• The gut microbiota and psychiatric illness  Academic Article
• The impact of dietary fermentable carbohydrates on a postinflammatory model of irritable bowel syndrome  Academic Article
• The impact of early life gut colonization on metabolic and obesogenic outcomes: what have animal models shown us?  Academic Article
• The influence of maternal and infant nutrition on cardiometabolic traits: novel findings and future research directions from four Canadian birth cohort studies  Academic Article
• The microbiome and mental health: Hope or hype?  Academic Article
• The murine female intestinal microbiota does not shift throughout the estrous cycle  Academic Article
• The role of intestinal bacteria in ammonia detoxification ability of teleost fish  Academic Article
• The role of nutrition in pediatric oncology  Academic Article
• Thinking small: Zinc sensing by the gut epithelium  Academic Article
• Transcriptional markers of excitation-inhibition balance in germ-free mice show region-specific dysregulation and rescue after bacterial colonization  Academic Article
• Transformation of the Anticancer Drug Doxorubicin in the Human Gut Microbiome  Academic Article
• Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice  Academic Article
• Tryptophan‐derived serotonin‐kynurenine balance in immune activation and intestinal inflammation  Academic Article
• Type 2 diabetes influences bacterial tissue compartmentalisation in human obesity  Academic Article
• Vitamin D supplementation in pregnancy and early infancy in relation to gut microbiota composition and C. difficile colonization: implications for viral respiratory infections  Academic Article
• “WHAT'S BUGGING THE GUT IN OCD?” A REVIEW OF THE GUT MICROBIOME IN OBSESSIVE-COMPULSIVE DISORDER  Academic Article