Gene Expression Regulation, Bacterial
Concept
Vocabulary Service
Overview
subject area of
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(p)ppGpp-Dependent Regulation of the Nucleotide Hydrolase PpnN Confers Complement Resistance in Salmonella enterica Serovar Typhimurium Journal Articles
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Molecular characterization of the Pseudomonas aeruginosa serotype O5 (PAO1) B‐band lipopolysaccharide gene cluster Journal Articles
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Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD Journal Articles
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N‐acetyllactosamine‐induced retraction of bundle‐forming pili regulates virulence‐associated gene expression in enteropathogenic Escherichia coli Journal Articles
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Pseudomonas aeruginosaB-band lipopolysaccharide geneswbpAandwbpIand theirEscherichia colihomologueswecCandwecBare not functionally interchangeable Journal Articles
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SalmonellaProduces an O-Antigen Capsule Regulated by AgfD and Important for Environmental Persistence Journal Articles
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ampCgene expression in promoter mutants of cefoxitin-resistantEscherichia coliclinical isolates Journal Articles
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pfs-Dependent Regulation of Autoinducer 2 Production inSalmonella entericaSerovar Typhimurium Journal Articles
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PhoR autokinase activity is controlled by an intermediate in wall teichoic acid metabolism that is sensed by the intracellular PAS domain during the PhoPR‐mediated phosphate limitation response of Bacillus subtilis Journal Articles
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A Cryptic Polyene Biosynthetic Gene Cluster in Streptomyces calvus Is Expressed upon Complementation with a Functional bldA Gene Journal Articles
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A novel function for the competence inducing peptide, XIP, as a cell death effector ofStreptococcus mutans Journal Articles
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A novel inhibitor of Chlamydophila pneumoniae protein kinase D (PknD) inhibits phosphorylation of CdsD and suppresses bacterial replication Journal Articles
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Aerial development in Streptomyces coelicolor requires sortase activity Journal Articles
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Alkaloids Modulate Motility, Biofilm Formation and Antibiotic Susceptibility of Uropathogenic Escherichia coli Journal Articles
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An ABC-Type Cobalt Transport System Is Essential for Growth of Sinorhizobium melilotiat Trace Metal Concentrations Journal Articles
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An Effective Method for Quantifying RNA Expression of IbsC‐SibC, a Type I Toxin‐Antitoxin System in Escherichia coli Journal Articles
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Antagonistic regulation of motility and transcriptome expression by RpoN and RpoS in Escherichia coli Journal Articles
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BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2) Journal Articles
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Bringing order to a complex molecular machine: The assembly of the bacterial flagella Journal Articles
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Broad Spectrum Aminoglycoside Phosphotransferase Type III from Enterococcus: Overexpression, Purification, and Substrate Specificity Journal Articles
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Cell Wall Hydrolases Affect Germination, Vegetative Growth, and Sporulation in
Streptomyces coelicolor Journal Articles
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Characterization and genomic analysis of a diesel-degrading bacterium, Acinetobacter calcoaceticus CA16, isolated from Canadian soil Journal Articles
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Characterization of an inducible vancomycin resistance system in Streptomyces coelicolor reveals a novel gene (vanK) required for drug resistance Journal Articles
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Characterization of rcsB and rcsC from Escherichia coli O9:K30:H12 and examination of the role of the rcs regulatory system in expression of group I capsular polysaccharides Journal Articles
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Characterization of the Bacillus subtilis GTPase YloQ and its role in ribosome function Journal Articles
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Characterization of the Depletion of 2-
C
-Methyl-
d
-Erythritol-2,4-Cyclodiphosphate Synthase in
Escherichia coli
and
Bacillus subtilis Journal Articles
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Clades of huge phages from across Earth’s ecosystems Journal Articles
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Cloning and Characterization of ectABC Cluster from Bacillus alcalophilus DTY1 Journal Articles
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Communication in bacteria: an ecological and evolutionary perspective Journal Articles
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Comparative Genetics of the rdar Morphotype inSalmonella Journal Articles
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Comparative transcriptome analysis ofAgrobacterium tumefaciensin response to plant signal salicylic acid, indole-3-acetic acid and γ-amino butyric acid reveals signalling cross-talk andAgrobacterium-plant co-evolution Journal Articles
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Complex Intra-Operonic Dynamics Mediated by a Small RNA in Streptomyces coelicolor Journal Articles
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Comprehensive Analysis of Gene-Environmental Interactions with Temporal Gene Expression Profiles in Pseudomonas aeruginosa Journal Articles
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Contributions of Speed and Accuracy to Translational Selection in Bacteria Journal Articles
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Control of RpoS in global gene expression of Escherichia coli in minimal media Journal Articles
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Controlled induction of the RpoS regulon inEscherichia coli, using an RpoS-expressing plasmid Journal Articles
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Coordinated Regulation of Two Independent Cell-Cell Signaling Systems and Swarmer Differentiation inSalmonella entericaSerovar Typhimurium Journal Articles
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Crp Is a Global Regulator of Antibiotic Production in
Streptomyces Journal Articles
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Cyclic AMP-Independent Control of Twitching Motility in Pseudomonas aeruginosa Journal Articles
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Cysteine biosynthesis, oxidative stress and antibiotic resistance in Salmonella typhimurium Journal Articles
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DNA packaging bias and differential expression of gene transfer agent genes within a population during production and release of the Rhodobacter capsulatus gene transfer agent, RcGTA Journal Articles
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Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor Journal Articles
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Discovery of novel bacterial toxins by genomics and computational biology Journal Articles
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Dual Effects of MLS Antibiotics Journal Articles
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Dual role of a (p)ppGpp‐ and (p)ppApp‐degrading enzyme in biofilm formation and interbacterial antagonism Journal Articles
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Dysregulated Macrophage-Inflammatory Protein-2 Expression Drives Illness in Bacterial Superinfection of Influenza Journal Articles
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Effects of AttM lactonase on the pathogenicity ofStreptomyces scabies Journal Articles
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Effects of mesalamine (5-aminosalicylic acid) on bacterial gene expression Journal Articles
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Elimination of carbon catabolite repression in Clostridium acetobutylicum—a journey toward simultaneous use of xylose and glucose Journal Articles
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Elucidating the Function of the RpoS Regulon Journal Articles
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Emerging and divergent roles of pyrophosphorylated nucleotides in bacterial physiology and pathogenesis Journal Articles
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Environmental Regulation of
Pseudomonas aeruginosa
PAO1 Las and Rhl Quorum-Sensing Systems Journal Articles
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Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selection of Expanded Gene Content and Coordinated Gene Expression Journal Articles
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Evolution of Pseudomonas aeruginosa Virulence as a Result of Phage Predation Journal Articles
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Evolution of Salmonella-Host Cell Interactions through a Dynamic Bacterial Genome Journal Articles
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Evolution of the RpoS Regulon: Origin of RpoS and the Conservation of RpoS-Dependent Regulation in Bacteria Journal Articles
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Evolutionary loss of the rdar morphotype in Salmonella as a result of high mutation rates during laboratory passage Journal Articles
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Exploratory Growth in Streptomyces venezuelae Involves a Unique Transcriptional Program, Enhanced Oxidative Stress Response, and Profound Acceleration in Response to Glycerol Journal Articles
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Expression and Secretion Hierarchy in the Nonflagellar Type III Secretion System Journal Articles
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Expression of the Escherichia coli NRZ nitrate reductase is highly growth phase dependent and is controlled by RpoS, the alternative vegetative sigma factor Journal Articles
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Expression screening of bacterial libraries of recombinant alpha-1 proteinase inhibitor variants for candidates with thrombin inhibitory capacity Journal Articles
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Functional and Evolutionary Characterization of a Gene Transfer Agent’s Multilocus “Genome” Journal Articles
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Functional relatedness in the Inv/Mxi‐Spa type III secretion system family Journal Articles
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Gene Dispensability in Escherichia coli Grown in Thirty Different Carbon Environments Journal Articles
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Gene amelioration demonstrated: the journey of nascent genes in bacteria Journal Articles
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Genetic Interaction Screens with Ordered Overexpression and Deletion Clone Sets Implicate the
Escherichia coli
GTPase YjeQ in Late Ribosome Biogenesis Journal Articles
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Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria Journal Articles
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Genomic Instability in Regions Adjacent to a Highly ConservedpchProphage inEscherichia coliO157:H7 Generates Diversity in Expression Patterns of the LEE Pathogenicity Island Journal Articles
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Genomic Profiling of Iron-Responsive Genes in
Salmonella enterica
Serovar Typhimurium by High-Throughput Screening of a Random Promoter Library Journal Articles
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Genomic insights into the evolution and ecology of botulinum neurotoxins Journal Articles
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Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori Journal Articles
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Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933 Journal Articles
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Glycopeptide Sulfation Evades Resistance Journal Articles
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Hidden antibiotics in actinomycetes can be identified by inactivation of gene clusters for common antibiotics Journal Articles
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Hybrid sensor kinase PA1611 in Pseudomonas aeruginosa regulates transitions between acute and chronic infection through direct interaction with RetS Journal Articles
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Identification and characterization of hydrogen peroxide-sensitive mutants of Escherichia coli: genes that require OxyR for expression Journal Articles
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Identification of Conserved, RpoS-Dependent Stationary-Phase Genes of
Escherichia coli Journal Articles
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Identification of mutants with altered phenazine production in Pseudomonas aeruginosa Journal Articles
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Identification of the Regulatory Logic Controlling Salmonella Pathoadaptation by the SsrA-SsrB Two-Component System Journal Articles
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Identifying novel β-lactamase substrate activity through in silico prediction of antimicrobial resistance Journal Articles
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Impacts of peroxisome proliferator-activated receptor-γ activation on cigarette smoke-induced exacerbated response to bacteria Journal Articles
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Importance of the RpoE Regulon in Maintaining the Lipid Bilayer during Antimicrobial Treatment with the Polycationic Agent, Chlorhexidine Journal Articles
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Induction of Escherichia coli hydroperoxidase I by acetate and other weak acids Journal Articles
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Inter-replicon Gene Flow Contributes to Transcriptional Integration in the Sinorhizobium meliloti Multipartite Genome Journal Articles
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Interplay between Nucleoid-Associated Proteins and Transcription Factors in Controlling Specialized Metabolism in
Streptomyces Journal Articles
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Just-in-time transcription program in metabolic pathways Journal Articles
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Mapping and Regulation of Genes within Salmonella Pathogenicity Island 12 That Contribute to
In Vivo
Fitness of Salmonella enterica Serovar Typhimurium Journal Articles
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Metabolic differentiation in actively swarming Salmonella Journal Articles
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Metabolic suppression identifies new antibacterial inhibitors under nutrient limitation Journal Articles
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Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12 Journal Articles
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Modulation of Pseudomonas aeruginosa gene expression by host microflora through interspecies communication Journal Articles
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Modulation of Salmonella gene expression by subinhibitory concentrations of quinolones Journal Articles
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Modulation of secreted virulence factor genes by subinhibitory concentrations of antibiotics in Pseudomonas aeruginosa Journal Articles
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Molecular basis for CesT recognition of type III secretion effectors in enteropathogenic Escherichia coli Journal Articles
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Multifactorial genetic control and magnesium levels govern the production of a
Streptomyces
antibiotic with unusual cell density dependence Journal Articles
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Multiple histidines in the periplasmic domain of the Salmonella enterica sensor kinase SsrA enhance signaling in response to extracellular acidification Journal Articles
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Negative regulation of
Salmonella
pathogenicity island 2 is required for contextual control of virulence during typhoid Journal Articles
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New Kid on the Block: LmbU Expands the Repertoire of Specialized Metabolic Regulators in Streptomyces Journal Articles
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Novel Repressor of Escherichia coli O157:H7 Motility Encoded in the Putative Fimbrial Cluster OI-1 Journal Articles
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Novel Role for PilNO in Type IV Pilus Retraction Revealed by Alignment Subcomplex Mutations Journal Articles
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Nucleotide Second Messenger‐Mediated Regulation of a Muralytic Enzyme in Streptomyces Journal Articles
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Oligomeric lipoprotein PelC guides Pel polysaccharide export across the outer membrane of
Pseudomonas aeruginosa Journal Articles
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On the Road to Bacterial Cell Death Journal Articles
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Open-Source High-Throughput Phenomics of Bacterial Promoter-Reporter Strains Journal Articles
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Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria Journal Articles
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Pathogenic adaptation of intracellular bacteria by rewiring a
cis
-regulatory input function Journal Articles
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Pel Polysaccharide Biosynthesis Requires an Inner Membrane Complex Comprised of PelD, PelE, PelF, and PelG Journal Articles
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PelA and PelB proteins form a modification and secretion complex essential for Pel polysaccharide-dependent biofilm formation in Pseudomonas aeruginosa Journal Articles
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Persistence of Salmonella on Egg Conveyor Belts Is Dependent on the Belt Type but Not on the rdar Morphotype Journal Articles
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PhoPQ regulates acidic glycerophospholipid content of the
Salmonella
Typhimurium outer membrane Journal Articles
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PhoU Allows Rapid Adaptation to High Phosphate Concentrations by Modulating PstSCAB Transport Rate in Sinorhizobium meliloti Journal Articles
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Phosphate limitation induces catalase expression inSinorhizobium meliloti,Pseudomonas aeruginosaandAgrobacterium tumefaciens Journal Articles
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Phylogenetic analysis and molecular signatures defining a monophyletic clade of heterocystous cyanobacteria and identifying its closest relatives Journal Articles
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Polymorphism and selection of rpoS in pathogenic Escherichia coli Journal Articles
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Potentiation of Aminoglycoside Activity in Pseudomonas aeruginosa by Targeting the AmgRS Envelope Stress-Responsive Two-Component System Journal Articles
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Predation in Homogeneous and Heterogeneous Phage Environments Affects Virulence Determinants of Pseudomonas aeruginosa Journal Articles
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Programming gene expression with combinatorial promoters Journal Articles
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Proteomic Analysis of a NAP1 Clostridium difficile Clinical Isolate Resistant to Metronidazole Journal Articles
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Regulation and Properties of PstSCAB, a High-Affinity, High-Velocity Phosphate Transport System ofSinorhizobium meliloti Journal Articles
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Regulation of a muralytic enzyme-encoding gene by two non-coding RNAs Journal Articles
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Regulation of hydroperoxidase (catalase) expression inEscherichia coli Journal Articles
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Regulation of katF and katE in Escherichia coli K-12 by weak acids Journal Articles
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Regulators of oxidative stress response genes in Escherichia coli and their functional conservation in bacteria Journal Articles
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Regulatory Evolution Drives Evasion of Host Inflammasomes by Salmonella Typhimurium Journal Articles
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Regulatory evolution at the host–pathogen interface Journal Articles
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Repression of Intracellular Virulence Factors in
Salmonella
by the Hha and YdgT Nucleoid-Associated Proteins Journal Articles
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Role of RpoS in Virulence of Pathogens Journal Articles
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RpoE fine tunes expression of a subset of SsrB-regulated virulence factors in Salmonella enterica serovar Typhimurium Journal Articles
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RpoS regulation of gene expression during exponential growth of Escherichia coli K12 Journal Articles
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RpoS-Regulated Genes ofEscherichia coliIdentified by RandomlacZFusion Mutagenesis Journal Articles
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Salmonella Pathogenicity Island 2 Is Expressed Prior
to Penetrating the Intestine Journal Articles
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SapB and the chaplins: connections between morphogenetic proteins in Streptomyces coelicolor Journal Articles
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Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2 Journal Articles
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Silent but deadly: IS200 promotes pathogenicity in Salmonella Typhimurium Journal Articles
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Single-Residue Changes in the C-Terminal Disulfide-Bonded Loop of thePseudomonas aeruginosaType IV Pilin Influence Pilus Assembly and Twitching Motility Journal Articles
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Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli Journal Articles
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Specialized and shared functions of diguanylate cyclases and phosphodiesterases in Streptomyces development Journal Articles
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SseL Is a
Salmonella
-Specific Translocated Effector Integrated into the SsrB-Controlled
Salmonella
Pathogenicity Island 2 Type III Secretion System Journal Articles
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Stationary phase expression of the arginine biosynthetic operon argCBH in Escherichia coli Journal Articles
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Stochastic simulation of multiscale complex systems with PISKaS: A rule-based approach Journal Articles
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Streptomyces Exploration: Competition, Volatile Communication and New Bacterial Behaviours Journal Articles
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Structural Insights into the Regulation of Foreign Genes in Salmonella by the Hha/H-NS Complex Journal Articles
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Studies of the Interaction of
Escherichia coli
YjeQ with the Ribosome In Vitro Journal Articles
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Subinhibitory concentrations of tetracycline affect virulence gene expression in a multi-resistant Salmonella enterica subsp. enterica serovar Typhimurium DT104 Journal Articles
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Swarm-Cell Differentiation in
Salmonella
enterica
Serovar Typhimurium Results in Elevated Resistance to Multiple Antibiotics Journal Articles
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Synthetic Genetic Interactions Reveal a Dense and Cryptic Regulatory Network of Small Noncoding RNAs in Escherichia coli Journal Articles
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Targeting Bacterial Secretion Systems: Benefits of Disarmament in the Microcosm Journal Articles
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The
Mycobacterium tuberculosis
DosR Regulon Assists in Metabolic Homeostasis and Enables Rapid Recovery from Nonrespiring Dormancy Journal Articles
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The ARC2 response in Streptomcyes coelicolor requires the global regulatory genes afsR and afsS Journal Articles
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The Amino Terminus of
Bacillus subtilis
TagB Possesses Separable Localization and Functional Properties Journal Articles
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The Conserved Tetratricopeptide Repeat-Containing C-Terminal Domain of Pseudomonas aeruginosa FimV Is Required for Its Cyclic AMP-Dependent and -Independent Functions Journal Articles
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The Location of Substitutions and Bacterial Genome Arrangements Journal Articles
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The LysR-type PcaQ protein regulates expression of a protocatechuate-inducible ABC-type transport system in Sinorhizobium meliloti Journal Articles
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The Pel and Psl polysaccharides provide Pseudomonas aeruginosa structural redundancy within the biofilm matrix Journal Articles
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The Peptidoglycan-Binding Protein FimV Promotes Assembly of the
Pseudomonas aeruginosa
Type IV Pilus Secretin Journal Articles
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The Pseudomonas aeruginosa PilSR Two-Component System Regulates Both Twitching and Swimming Motilities Journal Articles
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The Therapeutic Pipeline for Pseudomonas aeruginosa Infections Journal Articles
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The YebC Family Protein PA0964 Negatively Regulates thePseudomonas aeruginosaQuinolone Signal System and Pyocyanin Production Journal Articles
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The complete sequence of the 1,683-kb pSymB megaplasmid from the N
2
-fixing endosymbiont
Sinorhizobium meliloti Journal Articles
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The lysine acetylome of the nematocidal bacterium Bacillus nematocida and impact of nematode on the acetylome Journal Articles
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The pdx genetic marker adjacent to the chloramphenicol biosynthesis gene cluster in Streptomyces venezuelae ISP5230: functional characterization The GenBank accession number for the sequence reported in this paper is AF286159. Journal Articles
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The plant signal salicylic acid shuts down expression of the
vir
regulon and activates quormone-quenching genes in
Agrobacterium Journal Articles
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The rcsA gene of Escherichia coli O9:K30:H12 is involved in the expression of the serotype-specific group I K (capsular) antigen Journal Articles
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The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella Journal Articles
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ThemviNhomolog inBurkholderia pseudomalleiis essential for viability and virulence Journal Articles
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Thermosensing Coordinates a Cis-regulatory Module for Transcriptional Activation of the Intracellular Virulence System in Salmonella enterica Serovar Typhimurium Journal Articles
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Transcriptional Priming of Salmonella Pathogenicity Island-2 Precedes Cellular Invasion Journal Articles
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Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two‐component regulator Journal Articles
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Transcriptional modulation of bacterial gene expression by subinhibitory concentrations of antibiotics Journal Articles
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Transcriptional regulation ofsdiAby cAMP-receptor protein, LeuO, and environmental signals inSalmonella entericaserovar Typhimurium Journal Articles
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Transcriptome Profiling and Functional Analysis ofAgrobacterium tumefaciensReveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved inAgrobacterium-Plant Interactions Journal Articles
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Type IV pilins regulate their own expression via direct intramembrane interactions with the sensor kinase PilS Journal Articles
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Type VI Secretion System-Associated Gene Clusters Contribute to Pathogenesis of Salmonella enterica Serovar Typhimurium Journal Articles
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‘Exploring’ the regulation of Streptomyces growth and development Journal Articles