Escherichia coli Proteins Concept

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• Near Ultraviolet Radiation (UVA and UVB) Causes a Formamidopyrimidine Glycosylase‐Dependent Increase in G to T Transversions  Journal Articles
• Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD  Journal Articles
• Escherichia coliHeat-Labile Enterotoxin B Subunit Is a More Potent Mucosal Adjuvant than Its Closely Related Homologue, the B Subunit of Cholera Toxin  Journal Articles
• In Vivo Formation of Protein Based Aqueous Microcompartments  Journal Articles
• N‐acetyllactosamine‐induced retraction of bundle‐forming pili regulates virulence‐associated gene expression in enteropathogenic Escherichia coli  Journal Articles
• ampCgene expression in promoter mutants of cefoxitin-resistantEscherichia coliclinical isolates  Journal Articles
• A Dual Reporter System for Detecting RNA Interactions in Bacterial Cells  Journal Articles
• A Forward Chemical Screen Identifies Antibiotic Adjuvants in Escherichia coli  Journal Articles
• A High-Throughput Screen of the GTPase Activity of Escherichia coli EngA to Find an Inhibitor of Bacterial Ribosome Biogenesis  Journal Articles
• A Highly Efficient Molecular Cloning Platform that Utilises a Small Bacterial Toxin Gene  Journal Articles
• A Thiolate Anion Buried within the Hydrocarbon Ruler Perturbs PagP Lipid Acyl Chain Selection  Journal Articles
• A comprehensive library of fluorescent transcriptional reporters for Escherichia coli  Journal Articles
• A divergent Pseudomonas aeruginosa palmitoyltransferase essential for cystic fibrosis‐specific lipid A  Journal Articles
• A genetic platform to investigate the functions of bacterial drug efflux pumps  Journal Articles
• A hydrocarbon ruler measures palmitate in the enzymatic acylation of endotoxin  Journal Articles
• A whole-cell, high-throughput hydrogenase assay to identify factors that modulate [NiFe]-hydrogenase activity  Journal Articles
• Acyldepsipeptide Antibiotics Induce the Formation of a Structured Axial Channel in ClpP: A Model for the ClpX/ClpA-Bound State of ClpP  Journal Articles
• Alkaloids Modulate Motility, Biofilm Formation and Antibiotic Susceptibility of Uropathogenic Escherichia coli  Journal Articles
• An msbB Homologue Carried in Plasmid pO157 Encodes an Acyltransferase Involved in Lipid A Biosynthesis in Escherichia coli O157:H7  Journal Articles
• An Effective Method for Quantifying RNA Expression of IbsC‐SibC, a Type I Toxin‐Antitoxin System in Escherichia coli  Journal Articles
• Analysis of the cleavage site specificity of the endopeptidase involved in the maturation of the large subunit of hydrogenase 3 from Escherichia coli  Journal Articles
• Antagonistic regulation of motility and transcriptome expression by RpoN and RpoS in Escherichia coli  Journal Articles
• ApmA Is a Unique Aminoglycoside Antibiotic Acetyltransferase That Inactivates Apramycin  Journal Articles
• Asymmetrical Evolution of Cytochrome bd Subunits  Journal Articles
• Bacterial Chemotaxis: The motor connection  Journal Articles
• Catalytic Residues and an Electrostatic Sandwich That Promote Enolpyruvyl Shikimate 3-Phosphate Synthase (AroA) Catalysis  Journal Articles
• Characterization of Shiga toxin-producing Escherichia coli presence, serogroups and risk factors from private groundwater sources in western Ireland  Journal Articles
• Characterization of rcsB and rcsC from Escherichia coli O9:K30:H12 and examination of the role of the rcs regulatory system in expression of group I capsular polysaccharides  Journal Articles
• Characterization of the Depletion of 2- C -Methyl- d -Erythritol-2,4-Cyclodiphosphate Synthase in Escherichia coli and Bacillus subtilis  Journal Articles
• Chemical genomics in Escherichia coli identifies an inhibitor of bacterial lipoprotein targeting  Journal Articles
• Clinically relevant mutations in core metabolic genes confer antibiotic resistance  Journal Articles
• Cloning of the hsp70 (dnaK) genes from Rhizobium meliloti and Pseudomonas cepacia: phylogenetic analyses of mitochondrial origin based on a highly conserved protein sequence  Journal Articles
• Combiningin situproteolysis and mass spectrometry to crystallizeEscherichia coliPgaB  Journal Articles
• Conserved inserts in the Hsp60 (GroEL) and Hsp70 (DnaK) proteins are essential for cellular growth  Journal Articles
• Controlled induction of the RpoS regulon inEscherichia coli, using an RpoS-expressing plasmid  Journal Articles
• Cooperative and Critical Roles for Both G Domains in the GTPase Activity and Cellular Function of Ribosome-Associated Escherichia coli EngA  Journal Articles
• Cryo-electron microscopy structure of the 30S subunit in complex with the YjeQ biogenesis factor  Journal Articles
• Crystal Structure of the Passenger Domain of the Escherichia coli Autotransporter EspP  Journal Articles
• Decoding Toxicity  Journal Articles
• Degradation of MAC13243 and studies of the interaction of resulting thiourea compounds with the lipoprotein targeting chaperone LolA  Journal Articles
• Development and use of a 293 cell line expressing lac repressor for the rescue of recombinant adenoviruses expressing high levels of rabies virus glycoprotein.  Journal Articles
• Dimerization Is Required for the Activity of the Protein Histidine Kinase CheA That Mediates Signal Transduction in Bacterial Chemotaxis  Journal Articles
• Distinct Molecular Features of NleG Type 3 Secreted Effectors Allow for Different Roles during Citrobacter rodentium Infection in Mice  Journal Articles
• Distinctive Protein Signatures Provide Molecular Markers and Evidence for the Monophyletic Nature of the Deinococcus-Thermus Phylum  Journal Articles
• Eliminating Competition: Characterizing and Eliminating Competitive Binding at Separate Sites between DAHP Synthase’s Essential Metal Ion and the Inhibitor DAHP Oxime  Journal Articles
• Emerging Roles for Anionic Non-Bilayer Phospholipids in Fortifying the Outer Membrane Permeability Barrier  Journal Articles
• Endonuclease III and endonuclease IV protect Escherichia coli from the lethal and mutagenic effects of near-UV irradiation  Journal Articles
• Enterobacterial lipocalins precede vibrio homologue  Journal Articles
• Enzymology of lipid A palmitoylation in bacterial outer membranes  Journal Articles
• EspP, an Extracellular Serine Protease from Enterohemorrhagic E. coli, Reduces Coagulation Factor Activities, Reduces Clot Strength, and Promotes Clot Lysis  Journal Articles
• Evidence of Kinetic Control of Ligand Binding and Staged Product Release in MurA (Enolpyruvyl UDP-GlcNAc Synthase)-Catalyzed Reactions,  Journal Articles
• Exploring Intermolecular Interactions of a Substrate Binding Protein Using a Riboswitch-Based Sensor  Journal Articles
• Expression and Secretion of Salmonella Pathogenicity Island-2 Virulence Genes in Response to Acidification Exhibit Differential Requirements of a Functional Type III Secretion Apparatus and SsaL  Journal Articles
• Functional diversification of the NleG effector family in enterohemorrhagic Escherichia coli  Journal Articles
• Gauging a Hydrocarbon Ruler by an Intrinsic Exciton Probe  Journal Articles
• Gene Dispensability in Escherichia coli Grown in Thirty Different Carbon Environments  Journal Articles
• Generation and Analysis of a Mouse Intestinal Metatranscriptome through Illumina Based RNA-Sequencing  Journal Articles
• Genetic Interaction Screens with Ordered Overexpression and Deletion Clone Sets Implicate the Escherichia coli GTPase YjeQ in Late Ribosome Biogenesis  Journal Articles
• Genetic and Chemical-Genetic Interactions Map Biogenesis and Permeability Determinants of the Outer Membrane of Escherichia coli  Journal Articles
• Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933  Journal Articles
• Heterologous production of 3-hydroxyvalerate in engineered Escherichia coli  Journal Articles
• High-Throughput Screening Identifies Novel Inhibitors of the Acetyltransferase Activity of Escherichia coli GlmU  Journal Articles
• Host Defense Peptide Resistance Contributes to Colonization and Maximal Intestinal Pathology by Crohn's Disease-Associated Adherent-Invasive Escherichia coli  Journal Articles
• Host cell reactivation of gene expression for an adenovirus-encoded reporter gene reflects the repair of UVC-induced cyclobutane pyrimidine dimers and methylene blue plus visible light-induced 8-oxoguanine  Journal Articles
• Identification and Partial Purification of DnaK Homologue from Extremely Halophilic Archaebacteria, Halobacterium cutirubrum  Journal Articles
• Identification and characterization of hydrogen peroxide-sensitive mutants of Escherichia coli: genes that require OxyR for expression  Journal Articles
• Identification of Conserved, RpoS-Dependent Stationary-Phase Genes of Escherichia coli  Journal Articles
• Identification of high affinity membrane-bound fatty acid-binding proteins using a photoreactive fatty acid  Journal Articles
• Imipridone Anticancer Compounds Ectopically Activate the ClpP Protease and Represent a New Scaffold for Antibiotic Development  Journal Articles
• Induction of Escherichia coli hydroperoxidase I by acetate and other weak acids  Journal Articles
• Inscribing the Perimeter of the PagP Hydrocarbon Ruler by Site-Specific Chemical Alkylation  Journal Articles
• Insertion/Deletion-Based Approach for the Detection of Escherichia coli O157:H7 in Freshwater Environments  Journal Articles
• Intravenous pegylated asparaginase versus intramuscular native Escherichia coli l-asparaginase in newly diagnosed childhood acute lymphoblastic leukaemia (DFCI 05-001): a randomised, open-label phase 3 trial  Journal Articles
• Isolation of the rstA Gene as a Multicopy Suppressor of YjeE, an Essential ATPase of Unknown Function in Escherichia coli  Journal Articles
• Known Bioactive Small Molecules Probe the Function of a Widely Conserved but Enigmatic Bacterial ATPase, YjeE  Journal Articles
• Maternal Nicotine Exposure Leads to Augmented Expression of the Antioxidant Adipose Tissue Triglyceride Lipase Long-Term in the White Adipose of Female Rat Offspring  Journal Articles
• Membrane charge and lipid packing determine polymyxin-induced membrane damage  Journal Articles
• Metabolic suppression identifies new antibacterial inhibitors under nutrient limitation  Journal Articles
• Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12  Journal Articles
• Modulating the Activity of Protein Conjugated to Gold Nanoparticles by Site-Directed Orientation and Surface Density of Bound Protein  Journal Articles
• Modulation of Hexa-Acyl Pyrophosphate Lipid A Population underEscherichia coliPhosphate (Pho) Regulon Activation  Journal Articles
• Molecular Mechanism for Lateral Lipid Diffusion between the Outer Membrane External Leaflet and a β-Barrel Hydrocarbon Ruler  Journal Articles
• Molecular basis for CesT recognition of type III secretion effectors in enteropathogenic Escherichia coli  Journal Articles
• NleG Type 3 Effectors from Enterohaemorrhagic Escherichia coli Are U-Box E3 Ubiquitin Ligases  Journal Articles
• Non-ribosomal factors in ribosome subunit assembly are emerging targets for new antibacterial drugs  Journal Articles
• On the Road to Bacterial Cell Death  Journal Articles
• Open-Source High-Throughput Phenomics of Bacterial Promoter-Reporter Strains  Journal Articles
• Overcoming mcr-1 mediated colistin resistance with colistin in combination with other antibiotics  Journal Articles
• PagP Activation in the Outer Membrane Triggers R3 Core Oligosaccharide Truncation in the Cytoplasm of Escherichia coli O157:H7  Journal Articles
• PagP Crystallized from SDS/Cosolvent Reveals the Route for Phospholipid Access to the Hydrocarbon Ruler  Journal Articles
• Pervasive Cryptic Epistasis in Molecular Evolution  Journal Articles
• Pharmacodynamics of dose-escalated ‘front-loading’ polymyxin B regimens against polymyxin-resistant mcr-1-harbouring Escherichia coli  Journal Articles
• Phenotypic investigations of the depletion of EngA inEscherichia coliare consistent with a role in ribosome biogenesis  Journal Articles
• Phosphoethanolamine substitution in the lipid A of Escherichia coli O157 : H7 and its association with PmrC  Journal Articles
• Phylogenetic Analysis of Mycoplasmas Based on Hsp70 Sequences: Cloning of the dnaK (hsp70) Gene Region of Mycoplasma capricolum  Journal Articles
• Polymorphism and selection of rpoS in pathogenic Escherichia coli  Journal Articles
• Potent Inhibition of 3-Deoxy-d-arabinoheptulosonate-7-phosphate (DAHP) Synthase by DAHP Oxime, a Phosphate Group Mimic  Journal Articles
• Probing amino acid side chains of the integral membrane protein PagP by solution NMR: Side chain immobilization facilitates association of secondary structures  Journal Articles
• Probing the active site of YjeE: a vital Escherichia coli protein of unknown function  Journal Articles
• Pseudomonas aeruginosa B-band O-antigen chain length is modulated by Wzz (Ro1)  Journal Articles
• Purification and characterization of VanR and the cytosolic domain of VanS: A two-component regulatory system required for vancomycin resistance in Enterococcus faecium BM4147  Journal Articles
• Receptor-mediated protein kinase activation and the mechanism of transmembrane signaling in bacterial chemotaxis  Journal Articles
• Regulated expression of plant tRNA genes by the prokaryotic tet and lac repressors.  Journal Articles
• Regulation and Properties of PstSCAB, a High-Affinity, High-Velocity Phosphate Transport System ofSinorhizobium meliloti  Journal Articles
• Regulation of Phosphate Assimilation in Rhizobium (Sinorhizobium) meliloti  Journal Articles
• Regulation of hydroperoxidase (catalase) expression inEscherichia coli  Journal Articles
• Regulators of oxidative stress response genes in Escherichia coli and their functional conservation in bacteria  Journal Articles
• Response regulator output in bacterial chemotaxis  Journal Articles
• Role of Fapy Glycosylase and UvrABC Excinuclease in the Repair of UVA (320‐400 nm)‐mediated DNA Damage in Escherichia coli  Journal Articles
• Role of lipid A palmitoylation in bacterial pathogenesis  Journal Articles
• Role of α-Helical Coiled-coil Interactions in Receptor Dimerization, Signaling, and Adaptation during Bacterial Chemotaxis  Journal Articles
• RpoS-Regulated Genes ofEscherichia coliIdentified by RandomlacZFusion Mutagenesis  Journal Articles
• Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli  Journal Articles
• Solution structure and dynamics of the outer membrane enzyme PagP by NMR  Journal Articles
• Specialized and shared functions of diguanylate cyclases and phosphodiesterases in Streptomyces development  Journal Articles
• Stationary Phase Expression of a Novel Escherichia coli Outer Membrane Lipoprotein and Its Relationship with Mammalian Apolipoprotein D  Journal Articles
• Stationary phase expression of the arginine biosynthetic operon argCBH in Escherichia coli  Journal Articles
• Structural and Kinetic Characterization of the LPS Biosynthetic Enzyme d-α,β-d-Heptose-1,7-bisphosphate Phosphatase (GmhB) from Escherichia coli,  Journal Articles
• Structural biology of membrane-intrinsic β-barrel enzymes: Sentinels of the bacterial outer membrane  Journal Articles
• Structural modifications of outer membrane vesicles to refine them as vaccine delivery vehicles  Journal Articles
• Structure and Function of APH(4)-Ia, a Hygromycin B Resistance Enzyme  Journal Articles
• Structure and Function of Sedoheptulose-7-phosphate Isomerase, a Critical Enzyme for Lipopolysaccharide Biosynthesis and a Target for Antibiotic Adjuvants  Journal Articles
• Studies of the Interaction of Escherichia coli YjeQ with the Ribosome In Vitro  Journal Articles
• Synthesis and evaluation of inhibitors of E. coli PgaB, a polysaccharide de-N-acetylase involved in biofilm formation  Journal Articles
• Systematic Genetic Screens Reveal the Dynamic Global Functional Organization of the Bacterial Translation Machinery  Journal Articles
• Taming of a Poison: Biosynthesis of the NiFe-Hydrogenase Cyanide Ligands  Journal Articles
• The ATPase activity of an ‘essential’ Bacillus subtilis enzyme, YdiB, is required for its cellular function and is modulated by oligomerization  Journal Articles
• The Mucosal Adjuvant Activities of ADP-Ribosylating Bacterial Enterotoxins  Journal Articles
• The Phylogeny and Signature Sequences Characteristics ofFibrobacteres,Chlorobi, andBacteroidetes  Journal Articles
• The Structure- and Metal-dependent Activity of Escherichia coli PgaB Provides Insight into the Partial De-N-acetylation of Poly-β-1,6-N-acetyl-d-glucosamine  Journal Articles
• The bacterial Kdp K ⁺ -ATPase and its relation to other transport ATPases, such as the Na ⁺ /K ⁺ - and Ca ²⁺ -ATPases in higher organisms  Journal Articles
• The bacterial lipocalins  Journal Articles
• The entericidin locus of Escherichia coli and its implications for programmed bacterial cell death  Journal Articles
• The integral membrane enzyme PagP alternates between two dynamically distinct states  Journal Articles
• The lipid A palmitoyltransferase PagP: molecular mechanisms and role in bacterial pathogenesis  Journal Articles
• The membrane bound bacterial lipocalin Blc is a functional dimer with binding preference for lysophospholipids  Journal Articles
• The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes  Journal Articles
• The regulator gene phoB mediates phosphate stress‐controlled synthesis of the membrane lipid diacylglyceryl‐N,N,N‐trimethylhomoserine in Rhizobium (Sinorhizobium) meliloti  Journal Articles
• The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator  Journal Articles
• The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga–Flavobacterium–Bacteroides division The GenBank accession numbers for the sequences reported in this paper are AY017380, AY017381, AY017382 and AY017383.  Journal Articles
• Three rhamnosyltransferases responsible for assembly of the A‐band D‐rhamnan polysaccharide in Pseudomonas aeruginosa: a fourth transferase, WbpL, is required for the initiation of both A‐band and B‐band lipopolysaccharide synthesis  Journal Articles
• Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two‐component regulator  Journal Articles
• UDP-N-acetylmuramic Acid (UDP-MurNAc) Is a Potent Inhibitor of MurA (Enolpyruvyl-UDP-GlcNAc Synthase)  Journal Articles
• Understanding ribosome assembly: the structure of in vivo assembled immature 30S subunits revealed by cryo-electron microscopy  Journal Articles
• Utilizing novel Escherichia coli‐specific conserved signature proteins for enhanced monitoring of recreational water quality  Journal Articles
• YjeQ, an Essential, Conserved, Uncharacterized Protein from Escherichia coli, Is an Unusual GTPase with Circularly Permuted G-Motifs and Marked Burst Kinetics  Journal Articles