Microbiota Concept

subject area of

• Burkholderia from Fungus Gardens of Fungus-Growing Ants Produces Antifungals That Inhibit the Specialized Parasite Escovopsis  Journal Articles
• StreptomycesVolatile Compounds Influence Exploration and Microbial Community Dynamics by Altering Iron Availability  Journal Articles
• A Hydroponic Co-cultivation System for Simultaneous and Systematic Analysis of Plant/Microbe Molecular Interactions and Signaling  Journal Articles
• A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis  Journal Articles
• A longitudinal characterization of the Non-Cystic Fibrosis Bronchiectasis airway microbiome  Journal Articles
• A marine microbiome antifungal targets urgent-threat drug-resistant fungi  Journal Articles
• A rich meconium metabolome in human infants is associated with early-life gut microbiota composition and reduced allergic sensitization  Journal Articles
• Altered colonic function and microbiota profile in a mouse model of chronic depression  Journal Articles
• Altered microbiomes of aquatic macroinvertebrates and riparian spiders downstream of municipal wastewater effluents  Journal Articles
• An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers  Journal Articles
• Analysis of the effects of microbiome-related confounding factors on the reproducibility of the volatolomic test  Journal Articles
• Antibiotic-perturbed microbiota and the role of probiotics.  Journal Articles
• Antibiotics Potentiate Adherent-InvasiveE. coliInfection and Expansion  Journal Articles
• Antibiotics and specialized metabolites from the human microbiota  Journal Articles
• Antibiotics and the nervous system: More than just the microbes?  Journal Articles
• Antibodies Encoded by FCRL4-Bearing Memory B Cells Preferentially Recognize Commensal Microbial Antigens  Journal Articles
• Assessment of the Microbial Constituents of the Home Environment of Individuals with Cystic Fibrosis (CF) and Their Association with Lower Airways Infections  Journal Articles
• Association of high-risk sexual behaviour with diversity of the vaginal microbiota and abundance of Lactobacillus  Journal Articles
• Associations of NOD2 polymorphisms with Erysipelotrichaceae in stool of in healthy first degree relatives of Crohn’s disease subjects  Journal Articles
• Azithromycin and the microbiota of cystic fibrosis sputum  Journal Articles
• Babies, bugs and brains: How the early microbiome associates with infant brain and behavior development  Journal Articles
• Beyond mitochondria: Alternative energy-producing pathways from all strata of life  Journal Articles
• Biogeography of Bacterial Communities and Specialized Metabolism in Human Aerodigestive Tract Microbiomes  Journal Articles
• Brain microbiota disruption within inflammatory demyelinating lesions in multiple sclerosis  Journal Articles
• Breastfeeding enrichment of B. longum subsp. infantis mitigates the effect of antibiotics on the microbiota and childhood asthma risk  Journal Articles
• Can we manage gut microbiome imbalances in patients with bipolar disorder with pharmacotherapy?  Journal Articles
• Canadian Association of Gastroenterology Position Statement: Fecal Microbiota Transplant Therapy  Journal Articles
• Capturing the Resistome: a Targeted Capture Method To Reveal Antibiotic Resistance Determinants in Metagenomes  Journal Articles
• Cellulose-Enriched Microbial Communities from Leaf-Cutter Ant (Atta colombica) Refuse Dumps Vary in Taxonomic Composition and Degradation Ability  Journal Articles
• Chronic Embryo‐Larval Exposure of Fathead Minnows to the Pharmaceutical Drug Metformin: Survival, Growth, and Microbiome Responses  Journal Articles
• Clinical Insights into Pulmonary Exacerbations in Cystic Fibrosis from the Microbiome. What Are We Missing?  Journal Articles
• Cobamide Sharing Is Predicted in the Human Skin Microbiome  Journal Articles
• Cognitive decline, dietary factors and gut–brain interactions  Journal Articles
• Colitis-associated microbiota drives changes in behaviour in male mice in the absence of inflammation  Journal Articles
• Commensal microbiota induces colonic barrier structure and functions that contribute to homeostasis  Journal Articles
• Comparison of the microbial communities of alpacas and sheep fed diets with three different ratios of corn stalk to concentrate  Journal Articles
• Competition among Nasal Bacteria Suggests a Role for Siderophore-Mediated Interactions in Shaping the Human Nasal Microbiota  Conferences
• Composition and immunological significance of the upper respiratory tract microbiota  Journal Articles
• Convergence of gut microbiomes in myrmecophagous mammals  Journal Articles
• Convergent evolution of signal-structure interfaces for maintaining symbioses  Journal Articles
• Crohn’s disease proteolytic microbiota enhances inflammation through PAR2 pathway in gnotobiotic mice  Journal Articles
• Culture and Molecular Profiling of the Respiratory Tract Microbiota  Journal Articles
• Culture and molecular-based profiles show shifts in bacterial communities of the upper respiratory tract that occur with age  Journal Articles
• Culture-enriched metagenomic sequencing enables in-depth profiling of the cystic fibrosis lung microbiota  Journal Articles
• Cystic Fibrosis Patients Infected With Epidemic Pseudomonas aeruginosa Strains Have Unique Microbial Communities  Journal Articles
• Decoding Microbiome Research for Clinical Psychiatry  Journal Articles
• Defense contracts: molecular protection in insect-microbe symbioses  Journal Articles
• Delayed gut microbiota maturation in the first year of life is a hallmark of pediatric allergic disease  Journal Articles
• Desiccation as a suitable alternative to cold-storage of phyllosphere samples for DNA-based microbial community analyses.  Journal Articles
• Dietary sugar lowers immunity and microbiota that protect against metabolic disease  Journal Articles
• Diet–microbial cross–talk underlying increased visceral perception  Journal Articles
• Dissecting mechanisms of fecal microbiota transplantation efficacy in disease  Journal Articles
• Disturbance–diversity relationships of microbial communities change based on growth substrate  Journal Articles
• Divergent maturational patterns of the infant bacterial and fungal gut microbiome in the first year of life are associated with inter-kingdom community dynamics and infant nutrition  Journal Articles
• Diversity of the cultivable human gut microbiome involved in gluten metabolism: isolation of microorganisms with potential interest for coeliac disease  Journal Articles
• Early infancy microbial and metabolic alterations affect risk of childhood asthma  Journal Articles
• Early life nasal microbiota in infants with cystic fibrosis  Journal Articles
• Early-life upper airway microbiota are associated with decreased lower respiratory tract infections.  Journal Articles
• Ecobiotherapy Rich in Firmicutes Decreases Susceptibility to Colitis in a Humanized Gnotobiotic Mouse Model  Journal Articles
• Effect of biodiesel addition on microbial community structure in a simulated fuel storage system  Journal Articles
• Effect of dietary iron supplementation on the equine fecal microbiome.  Journal Articles
• Effects of Cadmium Stress on Bacterial and Fungal Communities in the Whitefly Bemisia tabaci  Journal Articles
• Effects of chronic metal exposure and metamorphosis on the microbiomes of larval and adult insects and riparian spiders through the aquatic-riparian food web.  Journal Articles
• Effects of copper sulphate and coated copper sulphate addition on lactation performance, nutrient digestibility, ruminal fermentation and blood metabolites in dairy cows  Journal Articles
• Effects of municipal wastewater effluents on the digestive gland microbiome of wild freshwater mussels (Lasmigona costata)  Journal Articles
• Effects of municipal wastewater effluents on the invertebrate microbiomes of an aquatic-riparian food web.  Journal Articles
• Effects of riboflavin supplementation on performance, nutrient digestion, rumen microbiota composition and activities of Holstein bulls  Journal Articles
• Empirical, Metagenomic, and Computational Techniques Illuminate the Mechanisms by which Fungicides Compromise Bee Health  Journal Articles
• Endometrial microbiota is more diverse in people with endometriosis than symptomatic controls  Journal Articles
• Epidemiology of Asthma and Influence of Ethnicity  Journal Articles
• Evaluation of gallnut tannin and Lactobacillus plantarum as natural modifiers for alfalfa silage: Ensiling characteristics, in vitro ruminal methane production, fermentation profile and microbiota  Journal Articles
• Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC  Journal Articles
• Experimental evolution makes microbes more cooperative with their local host genotype  Journal Articles
• Exploring bacterial pathogen community dynamics in freshwater beach sediments: A tale of two lakes  Journal Articles
• Exploring the Cystic Fibrosis Lung Microbiome: Making the Most of a Sticky Situation  Journal Articles
• Exposure to high fructose corn syrup during adolescence in the mouse alters hepatic metabolism and the microbiome in a sex‐specific manner  Journal Articles
• Fecal Microbiota Transplantation Induces Remission in Patients With Active Ulcerative Colitis in a Randomized Controlled Trial  Journal Articles
• Fecal transplantation  Journal Articles
• Fetal meconium does not have a detectable microbiota before birth  Journal Articles
• Fluctuations in populations of subsurface methane oxidizers in coordination with changes in electron acceptor availability  Journal Articles
• Forces shaping the antibiotic resistome  Journal Articles
• Forgotten fungi: the importance of the skin mycobiome  Journal Articles
• Fungal DNA barcoding  Journal Articles
• Fungus-growing insects host a distinctive microbiota apparently adapted to the fungiculture environment  Journal Articles
• Gut Microbial and Metabolic Responses to Salmonella enterica Serovar Typhimurium and Candida albicans  Journal Articles
• Gut Microbiome and Behavior  Chapters
• Gut brain axis: diet microbiota interactions and implications for modulation of anxiety and depression  Journal Articles
• Gut microbes and adverse food reactions: Focus on gluten related disorders  Journal Articles
• Gut microbiota-based vaccination engages innate immunity to improve blood glucose control in obese mice  Journal Articles
• Gut–brain axis: how the microbiome influences anxiety and depression  Journal Articles
• High Throughput Co-culture Assays for the Investigation of Microbial Interactions  Journal Articles
• High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant  Journal Articles
• Host immune interactions in chronic inflammatory gastrointestinal conditions  Journal Articles
• Human macrophage response to microbial supernatants from diabetic foot ulcers  Journal Articles
• Human microbiota research in Africa: a systematic review reveals gaps and priorities for future research  Journal Articles
• Human milk fungi: environmental determinants and inter-kingdom associations with milk bacteria in the CHILD Cohort Study  Journal Articles
• Human milk oligosaccharides promote intestinal epithelium regeneration independent of the microbiota during necrotizing enterocolitis  Journal Articles
• Human vaginal microbiota colonization is regulated by female sex hormones in a mouse model  Journal Articles
• Hydrogen sulphide protects against NSAID‐enteropathy through modulation of bile and the microbiota  Journal Articles
• IL-17 Production by γδ+ T Cells Is Critical for Inducing Th17 Responses in the Female Genital Tract and Regulated by Estradiol and Microbiota  Journal Articles
• Immunometabolism of obesity and diabetes: microbiota link compartmentalized immunity in the gut to metabolic tissue inflammation  Journal Articles
• Impact of Standard Bacterial Vaginosis Treatment on the Genital Microbiota, Immune Milieu, and Ex Vivo Human Immunodeficiency Virus Susceptibility  Journal Articles
• Impact of oil spills on coral reefs can be reduced by bioremediation using probiotic microbiota  Journal Articles
• Infant Vitamin D Supplements, Fecal Microbiota and Their Metabolites at 3 Months of Age in the CHILD Study Cohort  Journal Articles
• Infant gut microbiota and food sensitization: associations in the first year of life  Journal Articles
• Infection in an aging population  Journal Articles
• Influence of early environmental factors on lymphocyte subsets and gut microbiota in infants at risk of celiac disease; the PROFICEL study.  Journal Articles
• Influence of wastewater microbial community on the performance of miniaturized microbial fuel cell biosensor  Journal Articles
• Interleukin-15 Modulates Adipose Tissue by Altering Mitochondrial Mass and Activity  Journal Articles
• Intestinal Microbial Composition of Children in a Randomized Controlled Trial of Probiotics to Treat Acute Gastroenteritis  Journal Articles
• Intestinal colonization among very low birth weight infants in first week of life  Journal Articles
• Intestinal microbiota influence the early postnatal development of the enteric nervous system  Journal Articles
• Investigating statistical power of differential abundance studies.  Journal Articles
• Key aspects of papillomavirus infection influence the host cervicovaginal microbiome in a preclinical murine papillomavirus (MmuPV1) infection model  Journal Articles
• L. rhamnosus improves the immune response and tryptophan catabolism in laying hen pullets  Journal Articles
• Large freshwater phages with the potential to augment aerobic methane oxidation  Journal Articles
• Laryngotracheal Microbiota in Adult Laryngotracheal Stenosis  Journal Articles
• Letter to the Editor: Too Soon to Dismiss Inflammation-Related Differences in the Mucosa-Associated Microbiota in Crohn’s Disease Patients  Journal Articles
• Leveraging the microbiome to understand clinical heterogeneity in depression: findings from the T-RAD study  Journal Articles
• Living in Your Skin: Microbes, Molecules, and Mechanisms  Journal Articles
• Long term but not short term exposure to obesity related microbiota promotes host insulin resistance  Journal Articles
• Long-Term Cellulose Enrichment Selects for Highly Cellulolytic Consortia and Competition for Public Goods  Journal Articles
• Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis  Journal Articles
• Loss of Microbial Topography Precedes Infection in Infants  Journal Articles
• Low dose antibiotic ingestion potentiates systemic and microbiome changes induced by silver nanoparticles  Journal Articles
• Making the case for causality: what role do lung microbiota play in idiopathic pulmonary fibrosis?  Journal Articles
• Measuring the microbiome of chronic wounds with use of a topical antimicrobial dressing – A feasibility study  Journal Articles
• Mechanisms Underlying Food-Triggered Symptoms in Disorders of Gut-Brain Interactions  Journal Articles
• Mechanisms of mucosal immunity at the female reproductive tract involved in defense against HIV infection  Journal Articles
• Medroxyprogesterone acetate alters the vaginal microbiota and microenvironment in women and increases susceptibility to HIV-1 in humanized mice  Journal Articles
• Microbes and mental health: Can the microbiome help explain clinical heterogeneity in psychiatry?  Journal Articles
• Microbes and mood: innovative biomarker approaches in depression.  Journal Articles
• Microbes are trophic analogs of animals  Journal Articles
• Microbe–Immune–Stress Interactions Impact Behaviour during Postnatal Development  Journal Articles
• Microbial biogeography of the eastern Yucatán carbonate aquifer  Journal Articles
• Microbial colonization programs are structured by breastfeeding and guide healthy respiratory development.  Journal Articles
• Microbial communities and soil chemical features associated with commercial production of the medicinal mushroom Ganoderma lingzhi in soil  Journal Articles
• Microbial community modulates growth of symbiotic fungus required for stingless bee metamorphosis  Journal Articles
• Microbiome functioning depends on individual and interactive effects of the environment and community structure  Journal Articles
• Microbiome: fecal transplant in Clostridium difficile and ulcerative colitis  Journal Articles
• Microbiome: fecal transplant in Clostridium difficile and ulcerative colitis. Dr. Paul Moayyedi in an interview with Dr. Roman Jaeschke: part 2  Journal Articles
• Microbiome: the beginning of understanding  Journal Articles
• Microbiome: the beginning of understanding Dr. Paul Moayyedi in an interview with Dr. Roman Jaeschke: part 1  Journal Articles
• Microbiomes: Getting to the root of the rhizobial competition problem in agriculture  Journal Articles
• Microbiomes: How a gut bacterium promotes healthier living in a nematode  Journal Articles
• Microbiota and Nod-like receptors balance inflammation and metabolism during obesity and diabetes  Journal Articles
• Microbiota and functional analyses of nitrogen-fixing bacteria in root-knot nematode parasitism of plants  Journal Articles
• Microbiota at Multiple Body Sites during Pregnancy in a Rural Tanzanian Population and Effects of Moringa-Supplemented Probiotic Yogurt  Journal Articles
• Microbiota protect against frailty and loss of skeletal muscle, and maintain inflammatory tone during aging in mice.  Journal Articles
• Microbiota-Immune Interactions in Ulcerative Colitis and Colitis Associated Cancer and Emerging Microbiota-Based Therapies  Journal Articles
• Microbiota‐immune alterations in adolescents following early life adversity: A proof of concept study  Journal Articles
• Minimal changes in microbial abundances and diversity of 7 years of emplacement for modules of compacted bentonite exposed to natural groundwater  Journal Articles
• Monitoring Microbial Populations and Antibiotic Resistance Gene Enrichment Associated with Arctic Waste Stabilization Ponds  Journal Articles
• Multi-omic meta-analysis identifies functional signatures of airway microbiome in chronic obstructive pulmonary disease  Journal Articles
• Muramyl Dipeptide-Based Postbiotics Mitigate Obesity-Induced Insulin Resistance via IRF4  Journal Articles
• NSAID enteropathy and bacteria: a complicated relationship  Journal Articles
• Nasal Tissue Extraction Is Essential for Characterization of the Murine Upper Respiratory Tract Microbiota  Journal Articles
• Natural environments in the urban context and gut microbiota in infants  Journal Articles
• Networks of human milk microbiota are associated with host genomics, childhood asthma, and allergic sensitization.  Journal Articles
• Non-diphtheriae Corynebacterium species are associated with decreased risk of pneumococcal colonization during infancy  Journal Articles
• Nutritional profile of rodent diets impacts experimental reproducibility in microbiome preclinical research  Journal Articles
• Of the bugs that shape us: maternal obesity, the gut microbiome, and long-term disease risk  Journal Articles
• On-going Mechanical Damage from Mastication Drives Homeostatic Th17 Cell Responses at the Oral Barrier  Journal Articles
• Optimization of metabolomics of defined in vitro gut microbial ecosystems  Journal Articles
• Oral, Vaginal, and Stool Microbial Signatures in Patients With Endometriosis as Potential Diagnostic Non-Invasive Biomarkers: A Prospective Cohort Study.  Journal Articles
• PCB exposure is associated with reduction of endosymbionts in riparian spider microbiomes  Journal Articles
• Peripheral and central regulation of insulin by the intestine and microbiome  Journal Articles
• Pneumococcal Colonization and the Nasopharyngeal Microbiota of Children in Botswana  Journal Articles
• Postbiotics for NOD2 require nonhematopoietic RIPK2 to improve blood glucose and metabolic inflammation in mice  Journal Articles
• Pre-Diagnosis Diet Predicts Response to Exclusive Enteral Nutrition and Correlates with Microbiome in Pediatric Crohn Disease  Journal Articles
• Predicting biotic interactions and their variability in a changing environment  Journal Articles
• Prenatal vitamin C and fish oil supplement use are associated with human milk microbiota composition in the Canadian CHILD Cohort Study.  Journal Articles
• Presence of Archaea in the Indoor Environment and Their Relationships with Housing Characteristics  Journal Articles
• Probiotics for the prevention of allergy: A systematic review and meta-analysis of randomized controlled trials  Journal Articles
• Probiotics, prebiotics, and the host microbiome: the science of translation  Books
• Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies  Journal Articles
• Rapid Degradation of Deepwater Horizon Spilled Oil by Indigenous Microbial Communities in Louisiana Saltmarsh Sediments  Journal Articles
• Reemergence of Lower-Airway Microbiota in Lung Transplant Patients with Cystic Fibrosis  Journal Articles
• Regional and Longitudinal Dynamics of Cyanobacterial Blooms/Cyanobiome and Cyanotoxin Production in the Great Lakes Area.  Journal Articles
• Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women  Journal Articles
• Reply  Journal Articles
• Response of stream habitat and microbiomes to spruce budworm defoliation: New considerations for outbreak management  Journal Articles
• Resveratrol improves exercise performance and skeletal muscle oxidative capacity in heart failure  Journal Articles
• Role of sex hormones and the vaginal microbiome in susceptibility and mucosal immunity to HIV-1 in the female genital tract  Journal Articles
• Role of the Microbiome in Energy Regulation and Metabolism  Journal Articles
• SHP‐2 Phosphatase Prevents Colonic Inflammation by Controlling Secretory Cell Differentiation and Maintaining Host‐Microbiota Homeostasis  Journal Articles
• Saffron Pre-Treatment Promotes Reduction in Tissue Inflammatory Profiles and Alters Microbiome Composition in Experimental Colitis Mice  Journal Articles
• Single cell and tissue-transcriptomic analysis of murine bladders reveals age- and TNFα-dependent but microbiota-independent tertiary lymphoid tissue formation  Journal Articles
• Skin-associated Corynebacterium amycolatum shares cobamides.  Journal Articles
• Small molecule immunomodulins from cultures of the human microbiome member Lactobacillus plantarum  Journal Articles
• Social attraction mediated by fruit flies' microbiome  Journal Articles
• Sputum microbiota in adults with CF associates with response to inhaled tobramycin  Journal Articles
• Sputum microbiota is predictive of long-term clinical outcomes in young adults with cystic fibrosis  Journal Articles
• Stability of Microbial Community Profiles Associated with Compacted Bentonite from the Grimsel Underground Research Laboratory  Journal Articles
• Stable microbial community in compacted bentonite after 5 years of exposure to natural granitic groundwater  Journal Articles
• Statistical models and computational algorithms for discovering relationships in microbiome data  Journal Articles
• Strain- and Species-Level Variation in the Microbiome of Diabetic Wounds Is Associated with Clinical Outcomes and Therapeutic Efficacy  Journal Articles
• Streptococcus pneumoniae Colonization Disrupts the Microbial Community within the Upper Respiratory Tract of Aging Mice  Journal Articles
• Streptococcus pneumoniae Colonization Is Required To Alter the Nasal Microbiota in Cigarette Smoke-Exposed Mice  Journal Articles
• Sub-communities of the vaginal microbiota in pregnant and non-pregnant women  Journal Articles
• Sweat and Sebum Preferences of the Human Skin Microbiota  Journal Articles
• Systematic review: effect of probiotics on antibiotic-induced microbiome disruption.  Journal Articles
• Systems biosynthesis of secondary metabolic pathways within the oral human microbiome member Streptococcus mutans  Journal Articles
• Targeting the Microbiome for Mental Health: Hype or Hope?  Journal Articles
• Temporal Stability in Chronic Wound Microbiota Is Associated With Poor Healing  Journal Articles
• Tet2 deficiency drives liver microbiome dysbiosis triggering Tc1 cell autoimmune hepatitis  Journal Articles
• The Cystic Fibrosis Lung Microbiome  Journal Articles
• The Effects of Inflammation, Infection and Antibiotics on the Microbiota-Gut-Brain Axis  Chapters
• The Evolving Cystic Fibrosis Microbiome: A Comparative Cohort Study Spanning 16 Years  Journal Articles
• The Evolving Facets of Bacterial Vaginosis: Implications for HIV Transmission  Journal Articles
• The HLA-DQ2 genotype selects for early intestinal microbiota composition in infants at high risk of developing coeliac disease  Journal Articles
• The Loss of Topography in the Microbial Communities of the Upper Respiratory Tract in the Elderly  Journal Articles
• The Microbiome  Journal Articles
• The Nasopharyngeal Microbiota of Children With Respiratory Infections in Botswana  Journal Articles
• The Recovery, Interpretation and Use of Ancient Pathogen Genomes  Journal Articles
• The adoptive transfer of behavioral phenotype via the intestinal microbiota: experimental evidence and clinical implications  Journal Articles
• The antimicrobial potential of Streptomyces from insect microbiomes  Journal Articles
• The dynamic balance of the skin microbiome across the lifespan  Journal Articles
• The effects of cycled inhaled aztreonam on the cystic fibrosis (CF) lung microbiome  Journal Articles
• The effects of inhaled aztreonam on the cystic fibrosis lung microbiome  Journal Articles
• The hygiene hypothesis, the COVID pandemic, and consequences for the human microbiome  Journal Articles
• The influence of the Doce River mouth on the microbiome of nearby coastal areas three years after the Fundão Dam failure, Brazil  Journal Articles
• The intestine and the microbiota in maternal glucose homeostasis during pregnancy  Journal Articles
• The maternal prenatal and offspring early‐life gut microbiome of childhood asthma phenotypes  Journal Articles
• The microbiota-gut-brain axis in functional gastrointestinal disorders  Journal Articles
• The microbiota–gut–brain axis in gastrointestinal disorders: stressed bugs, stressed brain or both?  Journal Articles
• The otic microbiota and mycobiota in a referral population of dogs in eastern USA with otitis externa  Journal Articles
• The outcome and long-term follow-up of 94 patients with recurrent and refractory Clostridium difficile infection using single to multiple fecal microbiota transplantation via retention enema  Journal Articles
• The phyllosphere microbiome shifts toward combating melanose pathogen  Journal Articles
• The porcine skin microbiome exhibits broad fungal antagonism  Journal Articles
• The relationship between sex hormones, the vaginal microbiome and immunity in HIV-1 susceptibility in women  Journal Articles
• The role of the microbiome in nonhealing diabetic wounds  Journal Articles
• Thousands of small, novel genes predicted in global phage genomes  Journal Articles
• Two-for-one: Dual host-microbe functions of S. epidermidis Sph  Journal Articles
• Unique Honey Bee (Apis mellifera) Hive Component-Based Communities as Detected by a Hybrid of Phospholipid Fatty-Acid and Fatty-Acid Methyl Ester Analyses  Journal Articles
• Unique microbial-derived volatile organic compounds in portal venous circulation in murine non-alcoholic fatty liver disease  Journal Articles
• Universal microbial reworking of dissolved organic matter along environmental gradients  Journal Articles
• Upper respiratory microbial communities of healthy populations are shaped by niche and age.  Journal Articles
• Vagal Pathways for Microbiome-Brain-Gut Axis Communication  Chapters
• Vaginal microbiota associated with oncogenic HPV in a cohort of HPV-vaccinated women living with HIV  Journal Articles
• What is slough? Defining the proteomic and microbial composition of slough and its implications for wound healing  Journal Articles
• What to Expect When You’re Expectorating: Cystic Fibrosis Exacerbations and Microbiota  Journal Articles
• Who’s talking to whom: microbiome-enteric nervous system interactions in early life  Journal Articles
• mbtransfer: Microbiome intervention analysis using transfer functions and mirror statistics  Journal Articles