Thermodynamics Concept

subject area of

• A Quantitative Scale for the Extent of Conjugation of the Amide Bond. Amidity Percentage as a Chemical Driving Force  Academic Article
• A Study of the Conformational Properties of Glucagon in the Presence of Glycols  Academic Article
• A Thermodynamic Basis for Prebiotic Amino Acid Synthesis and the Nature of the First Genetic Code  Academic Article
• A biophysical study on the mechanism of interactions of DOX or PTX with α-lactalbumin as a delivery carrier  Academic Article
• A comparison of the interaction of glucagon, human parathyroid hormone-(1-34)-peptide and calcitonin with dimyristoylphosphatidylglycerol and with dimyristoylphosphatidylcholine  Academic Article
• A kinetic and equilibrium study of the denaturation of aspartic proteinases from the fungi, Endothia parasitica and Mucor miehei  Academic Article
• A parameterized, continuum electrostatic model for predicting protein pK_avalues  Academic Article
• A study of the interactions that stabilize DNA frayed wires  Academic Article
• A thermodynamic study of albumin adsorption onto some solid surfaces.  Academic Article
• A “Release” Protocol for Isothermal Titration Calorimetry  Academic Article
• Acid-induced fusion of liposomes: studies with 2,3-seco-5α-cholestan-2,3-dioic acid  Academic Article
• Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases  Academic Article
• Adsorption of thrombin from buffer and modified plasma to polystyrene resins containing sulphonate and sulphamide arginyl methyl ester groups  Academic Article
• Advances in the Detection of As in Environmental Samples Using Low Energy X-ray Fluorescence in a Scanning Transmission X-ray Microscope: Arsenic Immobilization by an Fe(II)-Oxidizing Freshwater Bacteria  Academic Article
• Allosteric Sensing of Fatty Acid Binding by NMR: Application to Human Serum Albumin  Academic Article
• Allosteric linkers in cAMP signalling  Academic Article
• Analysis of an allosteric binding site: the nucleoside inhibitor site of phosphorylase a  Academic Article
• Analysis of the pi-pi stacking interactions between the aminoglycoside antibiotic kinase APH(3')-IIIa and its nucleotide ligands  Academic Article
• Assessing the Amount of Quadruplex Structures Present within G2-Tract Synthetic Random-Sequence DNA Libraries  Academic Article
• Basic optothermal diffusion theory for interstitial laser photocoagulation  Academic Article
• Benchmarking pKa prediction methods for Lys115 in acetoacetate decarboxylase  Academic Article
• Calorimetric Relaxation and the Glass–Liquid Temperature Range of Acetaminophen–Nifedipine Alloys  Academic Article
• Calorimetric Relaxation in Pharmaceutical Molecular Glasses and Its Utility in Understanding Their Stability Against Crystallization  Academic Article
• Calorimetric detection of curvature strain in phospholipid bilayers  Academic Article
• Calorimetric study of peptide-phospholipid interactions: the glucagon-dimyristoylphosphatidylcholine complex  Academic Article
• Catalytic Mechanism of Enterococcal Kanamycin Kinase (APH(3‘)-IIIa):  Viscosity, Thio, and Solvent Isotope Effects Support a Theorell−Chance Mechanism  Academic Article
• Cationic amphiphiles and the solubilization of cholesterol crystallites in membrane bilayers  Academic Article
• Characterization of a new cancer-associated mutant of p53 with a missense mutation (K351N) in the tetramerization domain  Academic Article
• Chemical specificity and physical properties of the lipid bilayer in the regulation of protein kinase C by anionic phospholipids: evidence for the lack of a specific binding site for phosphatidylserine.  Academic Article
• Chloride Channels of Glycine and GABA Receptors with Blockers: Monte Carlo Minimization and Structure-Activity Relationships  Academic Article
• Comparative Analysis of Membrane-Associated Fusion Peptide Secondary Structure and Lipid Mixing Function of HIV gp41 Constructs that Model the Early Pre-Hairpin Intermediate and Final Hairpin Conformations  Academic Article
• Conformation of a tethered polymer in a leaky nanocavity  Academic Article
• Conformation transitions of a polyelectrolyte chain: A replica-exchange Monte-Carlo study  Academic Article
• Cooperativity of papain-substrate interaction energies in the S2 to S2' subsites  Academic Article
• Critical swelling in single phospholipid bilayers  Academic Article
• Crystallization Kinetics of Ultraviscous Acetaminophen by Heat Capacity and Enthalpy Measurements and Diffusion Control  Academic Article
• Cyclopolymerization Reactions of Diallyl Monomers: Exploring Electronic and Steric Effects Using DFT Reactivity Indices  Academic Article
• Dependence of the bilayer to hexagonal phase transition on amphiphile chain length  Academic Article
• Design of Novel Rho Kinase Inhibitors Using Energy Based Pharmacophore Modeling, Shape-Based Screening, in Silico Virtual Screening, and Biological Evaluation  Academic Article
• Diacylglycerols, lysolecithin, or hydrocarbons markedly alter the bilayer to hexagonal phase transition temperature of phosphatidylethanolamines  Academic Article
• Dielectric Studies of Molecular Motions in Amorphous Solid and Ultraviscous Acetaminophen  Academic Article
• Dielectric Study of Equimolar Acetaminophen–Aspirin, Acetaminophen–Quinidine, and Benzoic Acid–Progesterone Molecular Alloys in the Glass and Ultraviscous States and Their Relevance to Solubility and Stability  Academic Article
• Direct analysis of polyols using 3-nitrophenylboronic acid in capillary electrophoresis: thermodynamic and electrokinetic principles of molecular recognition  Academic Article
• Discrimination of native protein structures using atom–atom contact scoring  Academic Article
• Dynamic Heat Capacity and Relaxation Time of Ultraviscous Melt and Glassy Acetaminophen  Academic Article
• Dynamics of the Fragment of Thrombomodulin Containing the Fourth and Fifth Epidermal Growth Factor-like Domains Correlate with Function  Academic Article
• Editorial  Academic Article
• Editorial  Academic Article
• Effect of combined high pressure and mild heat on carrot pectinmethylesterase activity.  Academic Article
• Effect of phase transitions on the interaction of peptides and proteins with phospholipids  Academic Article
• Effects of metal binding affinity on the chemical and thermal stability of site-directed mutants of rat oncomodulin  Academic Article
• Effects of the ‘fusion peptide’ from measles virus on the structure of N-methyl dioleoylphosphatidylethanolamine membranes and their fusion with Sendai virus  Academic Article
• Elastic properties and line tension of self-assembled bilayer membranes  Academic Article
• Electron Transfer between Cytochromes c from Horse and Pseudomonas  Academic Article
• Energy‐Dissipating Polymeric Silicone Surfactants  Academic Article
• Enhanced binding and conformational selectivity in affinity capillary electrophoresis using a water-soluble resorcin[4]arene as intrinsic buffer and electrokinetic host  Academic Article
• Enhancement of soil retention for phenanthrene in binary cationic gemini and nonionic surfactant mixtures: Characterizing two-step adsorption and partition processes through experimental and modeling approaches  Academic Article
• Entropy change on the cooling and heating paths between liquid and glass and the residual entropy  Academic Article
• Establishing the Principles of Recognition in the Adenine-Binding Region of an Aminoglycoside Antibiotic Kinase [APH(3‘)-IIIa]  Academic Article
• Evolution of protein interfaces in multimers and fibrils  Academic Article
• Factors determining pressure perturbation calorimetry measurements: evidence for the formation of metastable states at lipid phase transitions  Academic Article
• Flexibility of “Polyunsaturated Fatty Acid Chains” and Peptide Backbones:  A Comparative ab Initio Study  Academic Article
• Fluctuation domains in adaptive evolution  Academic Article
• Fluorescent probes of membrane surface properties  Academic Article
• Folding thermodynamics of the hybrid-1 type intramolecular human telomeric G-quadruplex  Academic Article
• Formation Energies of Antiphase Boundaries in GaAs and GaP: An ab Initio Study  Academic Article
• Free Energy Changes in Reactions of Chymotrypsin with Substrates  Academic Article
• G-protein linked melatonin binding sites in the chicken lung  Academic Article
• GCN4 enhances the stability of the pore domain of potassium channel KcsA  Academic Article
• Gauging a Hydrocarbon Ruler by an Intrinsic Exciton Probe  Academic Article
• Giant surfactants provide a versatile platform for sub-10-nm nanostructure engineering  Academic Article
• High Temperature Stabilization of DNA in Complexes with Cationic Lipids  Academic Article
• High-throughput screening of holoprotein conformational stability by dynamic ligand exchange-affinity capillary electrophoresis  Academic Article
• Hydrophobic lipid additives affect membrane stability and phase behavior of N-monomethyldioleoylphosphatidylethanolamine  Academic Article
• Identification of a conserved 8 aa insert in the PIP5K protein in theSaccharomycetaceaefamily of fungi and the molecular dynamics simulations and structural analysis to investigate its potential functional role  Academic Article
• Impact of confinement on proteins concentrated in lithocholic acid based organic nanotubes  Academic Article
• Implications of Protonation and Substituent Effects for C−O and O−P Bond Cleavage in Phosphate Monoesters  Academic Article
• Induction of Flexibility through Protein-Protein Interactions  Academic Article
• Intracellular ion activities in Malpighian tubule cells ofRhodnius prolixus: evaluation of Na+-K+-2Cl-cotransport across the basolateral membrane  Academic Article
• Ion Solvation in Liquid Mixtures: Effects of Solvent Reorganization  Academic Article
• Irreversible Unfolding of the Neutral pH Form of Influenza Hemagglutinin Demonstrates That It Is Not in a Metastable State  Academic Article
• Is a calorie a calorie?  Academic Article
• Kinetic mechanism of the GCN5-related chromosomal aminoglycoside acetyltransferase AAC(6')-Ii from Enterococcus faecium: evidence of dimer subunit cooperativity  Academic Article
• Kinetics and Thermodynamics of Sucrose Hydrolysis from Real-Time Enthalpy and Heat Capacity Measurements  Academic Article
• Label-Free Assay for Thermodynamic Analysis of Protein−Ligand Interactions: A Multivariate Strategy for Allosteric Ligand Screening  Academic Article
• Linear Free Energy Relationship Analysis of Transition State Mimicry by 3-Deoxy-d-arabino-heptulosonate-7-phosphate (DAHP) Oxime, a DAHP Synthase Inhibitor and Phosphate Mimic  Academic Article
• Lipopolysaccharide, a Key Molecule Involved in the Synergism between Temporins in Inhibiting Bacterial Growth and in Endotoxin Neutralization  Academic Article
• Local Structural Preferences and Dynamics Restrictions in the Urea-Denatured State of SUMO-1: NMR Characterization  Academic Article
• Low molecular weight silicones particularly facilitate human serum albumin denaturation  Academic Article
• Mapping of Steroids Binding to 17β-Hydroxysteroid Dehydrogenase Type 1 Using Monte Carlo Energy Minimization Reveals Alternative Binding Modes  Academic Article
• Mechanisms of Specific versus Nonspecific Interactions of Aggregation-Prone Inhibitors and Attenuators  Academic Article
• Membrane Orientation of the SIV Fusion Peptide Determines Its Effect on Bilayer Stability and Ability to Promote Membrane Fusion  Academic Article
• Membrane activity of two short Trp-rich amphipathic peptides  Academic Article
• Meteorites and the RNA World: A Thermodynamic Model of Nucleobase Synthesis within Planetesimals  Academic Article
• Microbial Geoengineers  Academic Article
• Microbial Reverse Electrodialysis Cells for Synergistically Enhanced Power Production  Academic Article
• Modeling interactions between blocking and permeant cations in the NavMs channel  Academic Article
• Modulation of the bilayer to hexagonal phase transition of phosphatidylethanolamines by acylglycerols  Academic Article
• Modulation of the phase transition behavior of phosphatidylethanolamine by cholesterol and oxysterols  Academic Article
• Molecular Dynamics of Fibrinogen Adsorption onto Graphene, but Not onto Poly(ethylene glycol) Surface, Increases Exposure of Recognition Sites That Trigger Immune Response  Academic Article
• Molecular Mobility, Thermodynamics and Stability of Griseofulvin’s Ultraviscous and Glassy States from Dynamic Heat Capacity  Academic Article
• Mutual Protein-Ligand Conformational Selection Drives cGMP vs. cAMP Selectivity in Protein Kinase G  Academic Article
• NMR Spectroscopic Evidence for the Intermediacy of XeF₃⁻in XeF₂/F⁻Exchange, Attempted Syntheses and Thermochemistry of XeF₃⁻Salts, and Theoretical Studies of the XeF₃⁻Anion  Academic Article
• NMR methods to dissect the molecular mechanisms of disease-related mutations (DRMs): Understanding how DRMs remodel functional free energy landscapes  Academic Article
• Nanosecond molecular relaxations in lipid bilayers studied by high energy-resolution neutron scattering andin situdiffraction  Academic Article
• Nine questions on energy decomposition analysis  Academic Article
• Notes: Kinetic unfreezing of a binary alloy and configurational entropy  Academic Article
• Novel properties of cholesterol–dioleoylphosphatidylcholine mixtures  Academic Article
• Nuclear magnetic resonance studies of lipid hydration in monomethyldioleoylphosphatidylethanolamine dispersions  Academic Article
• On the interaction of peptides with calcium ions as studied by matrix-assisted laser desorption/ionization Fourier transform mass spectrometry: Towards peptide fishing using metal ion baits  Academic Article
• Orientation and Effects of Mastoparan X on Phospholipid Bicelles  Academic Article
• Pd(OAc)₂-Catalyzed C–H Activation/C–O Cyclization: Mechanism, Role of Oxidant—Probed by Density Functional Theory  Academic Article
• Penicillin's catalytic mechanism revealed by inelastic neutrons and quantum chemical theory  Academic Article
• Peptide-Induced Formation of Cholesterol-Rich Domains  Academic Article
• Performance of mesophilic anaerobic granules for removal of octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX) from aqueous solution  Academic Article
• Position-dependent energy of molecules in nano-confined water  Academic Article
• Potentialphilicity and potentialphobicity: Reactivity indicators for external potential changes from density functional reactivity theory  Academic Article
• Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment  Academic Article
• Predominant Interactions between μ-Conotoxin Arg-13 and the Skeletal Muscle Na⁺ Channel Localized by Mutant Cycle Analysis  Academic Article
• Probing the active site of YjeE: a vital Escherichia coli protein of unknown function  Academic Article
• Protein misfolding in endoplasmic reticulum stress with applications to renal diseases  Academic Article
• Protein-Protein Interaction in Purple Membrane  Academic Article
• Quantitative Scale for the Extent of Conjugation of Carbonyl Groups: “Carbonylicity” Percentage as a Chemical Driving Force  Academic Article
• Quantum Mechanics/Molecular Mechanics Restrained Electrostatic Potential Fitting  Academic Article
• Quantum Mechanics/Molecular Mechanics Strategies for Docking Pose Refinement: Distinguishing between Binders and Decoys in CytochromecPeroxidase  Academic Article
• RNA secondary structure: physical and computational aspects  Academic Article
• Reconstitution of rabbit sarcoplasmic reticulum calcium ATPase in a series of phosphatidylcholines containing a saturated and an unsaturated chain: suggestion of an optimal lipid environment  Academic Article
• Relationship of phospholipid hexagonal phases to biological phenomena  Academic Article
• Role of Dynamics in the Autoinhibition and Activation of the Hyperpolarization-activated Cyclic Nucleotide-modulated (HCN) Ion Channels  Academic Article
• Role of the position of unsaturation on the phase behavior and intrinsic curvature of phosphatidylethanolamines  Academic Article
• Role of the stereochemistry of the hydroxyl group of cholesterol and the formation of nonbilayer structures in phosphatidylethanolamines  Academic Article
• Similarity of Ca²⁺ -bound conformations of morphine and Met-enkephalin: A computational study  Academic Article
• Simultaneous pH and Temperature Measurements Using Pyranine as a Molecular Probe  Academic Article
• Solution structure and dynamics of the outer membrane enzyme PagP by NMR  Academic Article
• Specific 2-[125I]iodomelatonin binding sites in the duck adrenal gland  Academic Article
• Stereochemical and dynamic aspects of genetic recombination.  Academic Article
• Structural Aspects of the Interaction of peptidyl-glycylleucine-carboxyamide, a Highly Potent Antimicrobial Peptide from Frog Skin, with Lipids  Academic Article
• Structural Basis for Cyclic-Nucleotide Selectivity and cGMP-Selective Activation of PKG I  Academic Article
• Structural Relaxation of Acetaminophen Glass  Academic Article
• Structural model of a synthetic Ca2+ channel with bound Ca2+ ions and dihydropyridine ligand  Academic Article
• Structural properties of acidic phospholipids in complexes with calcitonin: a Fourier transform infrared spectroscopic investigation  Academic Article
• Studies of kinetics and equilibrium membrane binding of class A and class L model amphipathic peptides1This work was supported by the Medical Research Council of Canada, grant MT-7654 and in part by NIH 90734343.1  Academic Article
• Studies on the effect of the lipid phase transition on the interaction of glucagon with dimyristoyl glycerophosphocholine  Academic Article
• Substituent Effects on Dynamics at Conical Intersections: Cycloheptatrienes  Academic Article
• Subunit interactions in aspartate transcarbamylase. The interaction between catalytic and regulatory subunits and the effect of ligands  Academic Article
• Systemic Energy Management by Strategically Located Functional Components within Molecular Frameworks, Determined by Systems Chemistry  Academic Article
• Tau protein binds single-stranded DNA sequence specifically - the proof obtained in vitro with non-equilibrium capillary electrophoresis of equilibrium mixtures  Academic Article
• The Dissociation Chemistry of Ionized Methyl Carbamate and its Isomers Revisited: Theory and Experiment in Concert  Academic Article
• The Enthalpy of Acyl Chain Packing and the Apparent Water-Accessible Apolar Surface Area of Phospholipids  Academic Article
• The Influence of Ser-154, Cys-113, and the Phosphorylated Threonine Residue on the Catalytic Reaction Mechanism of Pin1  Academic Article
• The Transferable Tail:  Fusion of the N-Terminal Acidic Extension of Heparin Cofactor II to α₁-Proteinase Inhibitor M358R Specifically Increases the Rate of Thrombin Inhibition  Academic Article
• The antimicrobial peptide trichogin and its interaction with phospholipid membranes  Academic Article
• The apparent preferential interaction of human plasma high density apolipoprotein A-I with gel-state phospholipids  Academic Article
• The biological potency of a series of analogues of human calcitonin correlates with their interactions with phospholipids  Academic Article
• The effects of various peptides on the thermotropic properties of phosphatidylcholine bilayers  Academic Article
• The integral membrane enzyme PagP alternates between two dynamically distinct states  Academic Article
• The mechanism of lamellar-to-inverted hexagonal phase transitions in phosphatidylethanolamine: implications for membrane fusion mechanisms  Academic Article
• The oxidized form of cholesterol 3β-hydroxy-5-oxo-5,6-secocholestan-6-al induces structural and thermotropic changes in phospholipid membranes  Academic Article
• The relationship between the bilayer to hexagonal phase transition temperature in membranes and protein kinase C activity  Academic Article
• The role of hydroxyproline in collagen folding: Conformational energy calculations on oligopeptides containing proline and hydroxyproline  Academic Article
• The role of the phospholipid phase transition in the regulation of glucagon binding to lecithin  Academic Article
• The structure of the apocAMP‐binding domain ofHCN4 – a stepping stone toward understanding thecAMP‐dependent modulation of the hyperpolarization‐activated cyclic‐nucleotide‐gated ion channels  Academic Article
• Theoretical study of interaction of winter flounder antifreeze protein with ice  Academic Article
• Thermal denaturation of influenza virus and its relationship to membrane fusion  Academic Article
• Thermodynamic and NMR analysis of inhibitor binding to dihydrofolate reductase  Academic Article
• Thermodynamic aspects of some radioassays.  Academic Article
• Thermodynamic behaviour of gliadins mixture and the glass-softening transition of its dried state  Academic Article
• Thermodynamics of Methyl-β-cyclodextrin-Induced Lipid Vesicle Solubilization: Effect of Lipid Headgroup and Backbone  Academic Article
• Thermodynamics of the binding of human apolipoprotein A-I to dimyristoylphosphatidylglycerol.  Academic Article
• Thermoplastic Starch Processing and Characteristics—A Review  Academic Article
• Titrametric Characterization of pH-Induced Phase Transitions in Functionalized Microgels  Academic Article
• Transition Path from Two Apposed Membranes to a Stalk Obtained by a Combination of Particle Simulations and String Method  Academic Article
• Transition State Analysis of Acid-Catalyzed dAMP Hydrolysis  Academic Article
• Translocational Status of ApoB in the Presence of an Inhibitor of Microsomal Triglyceride Transfer Protein  Academic Article
• Transport of anionic azo dyes from aqueous solution to gemini surfactant-modified wheat bran: Synchrotron infrared, molecular interaction and adsorption studies  Academic Article
• True Arrhenius Relationships of Human Lactate Dehydrogenase  Academic Article
• True Arrhenius relationship of human lactate dehydrogenase.  Academic Article
• Ultrasonic and Densimetric Characterization of the Association of Cyclic AMP with the cAMP-Binding Domain of the Exchange Protein EPAC1  Academic Article
• Unfolding of Acrylodan-Labeled Human Serum Albumin Probed by Steady-State and Time-Resolved Fluorescence Methods  Academic Article
• [Mechanism and Surface Fractal Characteristics for the Adsorption of p-nitrophenol on Water-quenched Blast Furnace Slag].  Academic Article