Molecular Biology and Evolution (MBE)
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publication venue for
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Low Complexity Regions in Proteins and DNA are Poorly Correlated.
40:msad084.
2023
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Neofunctionalization of a Noncoding Portion of a DNA Transposon in the Coding Region of the Chimerical Sex-Determining Gene dm-W in Xenopus Frogs.
39:msac138.
2022
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Low Complexity Regions in Mammalian Proteins are Associated with Low Protein Abundance and High Transcript Abundance.
39:msac087.
2022
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Adaptive Shifts in Gene Regulation Underlie a Developmental Delay in Thermogenesis in High-Altitude Deer Mice.
37:2309-2321.
2020
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Erratum to: Developmental systems drift and the drivers of sex chromosome evolution.
37:1844-1844.
2020
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Evolution of Transcriptional Repressors Impacts Caenorhabditis Vulval Development.
37:1350-1361.
2020
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Developmental Systems Drift and the Drivers of Sex Chromosome Evolution.
37:799-810.
2020
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Can the RNA World Still Function without Cytidine?.
37:71-83.
2020
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The Gateway from Near into Remote Oceania: New Insights from Genome-Wide Data.
35:871-886.
2018
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Human-Specific Mutations and Positively Selected Sites in MARCO Confer Functional Changes.
35:440-450.
2018
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Functional and Evolutionary Characterization of a Gene Transfer Agent’s Multilocus “Genome”.
33:2530-2543.
2016
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Estimating the Frequency of Horizontal Gene Transfer Using Phylogenetic Models of Gene Gain and Loss.
33:1843-1857.
2016
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Shotgun Mitogenomics Provides a Reference Phylogenetic Framework and Timescale for Living Xenarthrans.
33:621-642.
2016
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Adaptive Modifications of Muscle Phenotype in High-Altitude Deer Mice Are Associated with Evolved Changes in Gene Regulation.
32:1962-1976.
2015
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Reduced Representation Genome Sequencing Suggests Low Diversity on the Sex Chromosomes of Tonkean Macaque Monkeys.
31:2425-2440.
2014
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OrthoMaM v8: A Database of Orthologous Exons and Coding Sequences for Comparative Genomics in Mammals.
31:1923-1928.
2014
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Ancient Whole Genome Enrichment Using Baits Built from Modern DNA.
31:1292-1294.
2014
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Less Is More in Mammalian Phylogenomics: AT-Rich Genes Minimize Tree Conflicts and Unravel the Root of Placental Mammals.
30:2134-2144.
2013
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Origin and Spread of Photosynthesis Based upon Conserved Sequence Features in Key Bacteriochlorophyll Biosynthesis Proteins.
29:3397-3412.
2012
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Testing the Infinitely Many Genes Model for the Evolution of the Bacterial Core Genome and Pangenome.
29:3413-3425.
2012
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Fossil Rhabdoviral Sequences Integrated into Arthropod Genomes: Ontogeny, Evolution, and Potential Functionality.
29:381-390.
2012
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Diversification of Wolbachia Endosymbiont in the Culex pipiens Mosquito.
28:2761-2772.
2011
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“Patchy-Tachy” Leads to False Positives for Recombination.
28:2549-2559.
2011
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Molecular Evolution of Cytochrome c Oxidase Underlies High-Altitude Adaptation in the Bar-Headed Goose.
28:351-363.
2011
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The Influence of Anticodon-Codon Interactions and Modified Bases on Codon Usage Bias in Bacteria.
27:2129-2140.
2010
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Similar Selective Factors Affect Both between-Gene and between-Exon Divergence in Drosophila.
26:859-866.
2009
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Uncorrected Nucleotide Bias in mtDNA Can Mimic the Effects of Positive Darwinian Selection.
25:2521-2524.
2008
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Coevolution of Codon Usage and tRNA Genes Leads to Alternative Stable States of Biased Codon Usage.
25:2279-2291.
2008
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Conserved Features and Evolutionary Shifts of the EDA Signaling Pathway Involved in Vertebrate Skin Appendage Development.
25:912-928.
2008
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Sexual Selection and Maintenance of Sex: Evidence from Comparisons of Rates of Genomic Accumulation of Mutations and Divergence of Sex-Related Genes in Sexual and Hermaphroditic Species of Caenorhabditis.
25:972-979.
2008
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Codon Usage in Mitochondrial Genomes: Distinguishing Context-Dependent Mutation from Translational Selection.
25:339-351.
2008
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Retroposed Elements and Their Flanking Regions Resolve the Evolutionary History of Xenarthran Mammals (Armadillos, Anteaters, and Sloths).
24:2573-2582.
2007
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Population Genetics Without Intraspecific Data.
24:1667-1677.
2007
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The Genesis and Spread of Reassortment Human Influenza A/H3N2 Viruses Conferring Adamantane Resistance.
24:1811-1820.
2007
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Functional Divergence in the Arabidopsis -1,3-Glucanase Gene Family Inferred by Phylogenetic Reconstruction of Expression States.
24:1045-1055.
2007
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Rapid Evolution of Outer Egg Membrane Proteins in the Drosophila melanogaster Subgroup: A Case of Ecologically Driven Evolution of Female Reproductive Traits.
24:929-938.
2007
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Gene Gain and Gene Loss in Streptococcus: Is It Driven by Habitat?.
23:2379-2391.
2006
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Gene gain and gene loss in Streptococcus:: Is it driven by habitat?.
23:2379-2391.
2006
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Selection and Slippage Creating Serine Homopolymers.
23:2017-2025.
2006
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Gene Regulation Divergence Is a Major Contributor to the Evolution of Dobzhansky–Muller Incompatibilities between Species of Drosophila.
23:1707-1714.
2006
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Estimating Selection Pressures from Limited Comparative Data.
23:1457-1459.
2006
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Estimating selection pressures from limited comparative data.
23:1457-1459.
2006
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Rapidly Evolving Genes of Drosophila: Differing Levels of Selective Pressure in Testis, Ovary, and Head Tissues Between Sibling Species.
22:1793-1801.
2005
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Evolution of RAG-1 in Polyploid Clawed Frogs.
22:1193-1207.
2005
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A Comprehensive Analysis of Mammalian Mitochondrial Genome Base Composition and Improved Phylogenetic Methods.
22:251-264.
2005
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Genome-Scale Phylogeny and the Detection of Systematic Biases.
21:1455-1458.
2004
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Patterns of Bacterial Gene Movement.
21:1294-1307.
2004
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Erratum.
20:1946-1946.
2003
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Sex-Linked Mammalian Sperm Proteins Evolve Faster Than Autosomal Ones.
20:1705-1709.
2003
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Unmelanized Plumage Patterns in Old World Leaf Warblers Do Not Correspond to Sequence Variation at the Melanocortin-1 Receptor Locus (MC1R).
20:1675-1681.
2003
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Rapid Evolution of the Sex-Determining Gene, transformer: Structural Diversity and Rate Heterogeneity Among Sibling Species of Drosophila.
20:441-452.
2003
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Comparison of Bayesian and Maximum Likelihood Bootstrap Measures of Phylogenetic Reliability.
20:248-254.
2003
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Factors Affecting the Errors in the Estimation of Evolutionary Distances Between Sequences.
20:1-9.
2003
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Mammalian Sperm Proteins Are Rapidly Evolving: Evidence of Positive Selection in Functionally Diverse Genes.
19:1973-1980.
2002
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The Pattern of Amino Acid Replacements in α/β-Barrels.
19:1846-1864.
2002
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Molecular Phylogeny of Living Xenarthrans and the Impact of Character and Taxon Sampling on the Placental Tree Rooting.
19:1656-1671.
2002
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Bayesian Phylogenetics Using an RNA Substitution Model Applied to Early Mammalian Evolution.
19:1591-1601.
2002
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Rapid Evolution of cis-Regulatory Sequences via Local Point Mutations.
18:1764-1770.
2001
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The Evolutionary Origins of Eukaryotic Protein Disulfide Isomerase Domains: New Evidence from the Amitochondriate Protist Giardia lamblia.
18:1455-1463.
2001
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Codon Bias and Base Composition Are Poor Indicators of Horizontally Transferred Genes.
18:404-412.
2001
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Core Histones of the Amitochondriate Protist, Giardia lamblia.
17:1156-1163.
2000
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Sex-related genes, directional sexual selection, and speciation.
15:901-909.
1998
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The mosaic nature of the eukaryotic nucleus.
15:779-788.
1998
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The structural basis of molecular adaptation.
15:355-369.
1998
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Phylogenetic analysis of the 90 kD heat shock family of protein sequences and an examination of the relationship among animals, plants, and fungi species..
12:1063-1073.
1995
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Sequence variation at the major histocompatibility complex locus DQ beta in beluga whales (Delphinapterus leucas).
12:582-593.
1995
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Protein-based phylogenies support a chimeric origin for the eukaryotic genome..
12:1-6.
1995
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A comprehensive study of genic variation in natural populations of Drosophila melanogaster. VII. Varying rates of genic divergence as revealed by two-dimensional electrophoresis..
9:507-525.
1992
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DETECTION OF A HYPERVARIABLE DNA LOCUS IN BIRDS BY HYBRIDIZATION WITH A MOUSE MHC PROBE.
8:433-446.
1991
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High level of divergence of male-reproductive-tract proteins, between Drosophila melanogaster and its sibling species, D. simulans..
5:182-191.
1988
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Low genic variation in male-reproductive-tract proteins of Drosophila melanogaster and D. simulans..
5:167-181.
1988
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Mitochondrial DNA variation and genetic structure in populations of Drosophila melanogaster..
4:622-637.
1987
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Identification of restriction-fragment-length polymorphisms in genomic DNA of the lesser snow goose (Anser caerulescens caerulescens)..
4:126-143.
1987
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Variance of sequence divergence..
1:439-441.
1984
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Estimates of DNA and protein sequence divergence: an examination of some assumptions..
1:125-142.
1984
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