Metagenomics Concept

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A Catalog of Reference Genomes from the Human Microbiome Journal Articles
A genomic catalog of Earth’s microbiomes Journal Articles
A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data Journal Articles
Aerobic proteobacterial methylotrophs in Movile Cave: genomic and metagenomic analyses Journal Articles
Antibiotic resistance is ancient Journal Articles
Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production Journal Articles
Are similarity- or phylogeny-based methods more appropriate for classifying internal transcribed spacer (ITS) metagenomic amplicons? Journal Articles
CARPDM: cost-effective antibiotic resistome profiling of metagenomic samples using targeted enrichment. Journal Articles
Capturing the Resistome: a Targeted Capture Method To Reveal Antibiotic Resistance Determinants in Metagenomes Journal Articles
Characterization of Taxonomic and Functional Dynamics Associated with Harmful Algal Bloom Formation in Recreational Water Ecosystems Journal Articles
Chemical and microbial diversity covary in fresh water to influence ecosystem functioning Journal Articles
Comprehensive prediction of secondary metabolite structure and biological activity from microbial genome sequences Journal Articles
Convergence of gut microbiomes in myrmecophagous mammals Journal Articles
Culture-enriched metagenomic sequencing enables in-depth profiling of the cystic fibrosis lung microbiota Journal Articles
Detecting microbial engraftment after FMT using placebo sequencing and culture enriched metagenomics to sort signals from noise. Journal Articles
Empirical, Metagenomic, and Computational Techniques Illuminate the Mechanisms by which Fungicides Compromise Bee Health Journal Articles
Factors That Affect Large Subunit Ribosomal DNA Amplicon Sequencing Studies of Fungal Communities: Classification Method, Primer Choice, and Error Journal Articles
Fluctuations in populations of subsurface methane oxidizers in coordination with changes in electron acceptor availability Journal Articles
Forces shaping the antibiotic resistome Journal Articles
Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factorization Journal Articles
Functional metagenomics reveals abundant polysaccharide-degrading gene clusters and cellobiose utilization pathways within gut microbiota of a wood-feeding higher termite Journal Articles
Functional metagenomics reveals novel β-galactosidases not predictable from gene sequences Journal Articles
Fungal DNA barcoding Journal Articles
Generation and Analysis of a Mouse Intestinal Metatranscriptome through Illumina Based RNA-Sequencing Journal Articles
Gut Microbial and Metabolic Responses to Salmonella enterica Serovar Typhimurium and Candida albicans Journal Articles
Gut microbiota dysbiosis in patients with hepatitis B virus-induced chronic liver disease covering chronic hepatitis, liver cirrhosis and hepatocellular carcinoma. Journal Articles
High Fat-High Fructose Diet-Induced Changes in the Gut Microbiota Associated with Dyslipidemia in Syrian Hamsters Journal Articles
Intestinal microbiota in functional bowel disorders: a Rome foundation report Journal Articles
Intrapartum antibiotics for GBS prophylaxis alter colonization patterns in the early infant gut microbiome of low risk infants Journal Articles
Metagenomic and chemical characterization of soil cobalamin production Journal Articles
Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens Journal Articles
Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems Journal Articles
Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment Journal Articles
Multisubstrate Isotope Labeling and Metagenomic Analysis of Active Soil Bacterial Communities Journal Articles
Novel Fecal Biomarkers That Precede Clinical Diagnosis of Ulcerative Colitis Journal Articles
PathFams: statistical detection of pathogen-associated protein domains Journal Articles
Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections Journal Articles
Population genomics and subgenome evolution of the allotetraploid frog Xenopus laevis in southern Africa Journal Articles
Recent progress in genetics, epigenetics and metagenomics unveils the pathophysiology of human obesity Journal Articles
Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas Journal Articles
Robust estimation of microbial diversity in theory and in practice Journal Articles
Shotgun metagenomic sequencing reveals freshwater beach sands as reservoir of bacterial pathogens Journal Articles
Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID platform. Journal Articles
Stability of Microbial Community Profiles Associated with Compacted Bentonite from the Grimsel Underground Research Laboratory Journal Articles
Structural Elucidation of a Metagenomic Urethanase and Its Engineering Towards Enhanced Hydrolysis Profiles. Journal Articles
The Ecobiomics project: Advancing metagenomics assessment of soil health and freshwater quality in Canada Journal Articles
Toward a Universal Unit for Quantification of Antibiotic Resistance Genes in Environmental Samples Journal Articles
Unraveling the functional dark matter through global metagenomics Journal Articles
Untapped "-omics": the microbial metagenome, estrobolome, and their influence on the development of breast cancer and response to treatment. Journal Articles
Upper respiratory microbial communities of healthy populations are shaped by niche and age. Journal Articles
vRhyme enables binning of viral genomes from metagenomes Journal Articles