Journal article
RNA-Seq effectively monitors gene expression in Eutrema salsugineum plants growing in an extreme natural habitat and in controlled growth cabinet conditions
Abstract
BackgroundThe investigation of extremophile plant species growing in their natural environment offers certain advantages, chiefly that plants adapted to severe habitats have a repertoire of stress tolerance genes that are regulated to maximize plant performance under physiologically challenging conditions. Accordingly, transcriptome sequencing offers a powerful approach to address questions concerning the influence of natural habitat on the …
Authors
Champigny MJ; Sung WW; Catana V; Salwan R; Summers PS; Dudley SA; Provart NJ; Cameron RK; Golding GB; Weretilnyk EA
Journal
BMC Genomics, Vol. 14, No. 1,
Publisher
Springer Nature
Publication Date
12 2013
DOI
10.1186/1471-2164-14-578
ISSN
1471-2164
Associated Experts
Fields of Research (FoR)
Medical Subject Headings (MeSH)
Adaptation, PhysiologicalBrassicaceaeCluster AnalysisGene Expression Regulation, PlantGenes, PlantHeterozygoteMolecular Sequence AnnotationMultivariate AnalysisPhenotypePlant LeavesPolymorphism, Single NucleotidePrincipal Component AnalysisRNA, PlantRNA, RibosomalSequence Analysis, RNAStress, PhysiologicalTranscriptome