Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Journal Articles uri icon

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abstract

  • One of the justifiable criticisms of human genetic studies is the underrepresentation of participants from diverse populations. Lack of inclusion must be addressed at-scale to identify causal disease factors and understand the genetic causes of health disparities. We present genome-wide associations for 2068 traits from 635,969 participants in the Department of Veterans Affairs Million Veteran Program, a longitudinal study of diverse United States Veterans. Systematic analysis revealed 13,672 genomic risk loci; 1608 were only significant after including non-European populations. Fine-mapping identified causal variants at 6318 signals across 613 traits. One-third (n = 2069) were identified in participants from non-European populations. This reveals a broadly similar genetic architecture across populations, highlights genetic insights gained from underrepresented groups, and presents an extensive atlas of genetic associations.

authors

  • Verma, Anurag
  • Huffman, Jennifer E
  • Rodriguez, Alex
  • Conery, Mitchell
  • Liu, Molei
  • Ho, Yuk-Lam
  • Kim, Youngdae
  • Heise, David A
  • Guare, Lindsay
  • Panickan, Vidul Ayakulangara
  • Garcon, Helene
  • Linares, Franciel
  • Costa, Lauren
  • Goethert, Ian
  • Tipton, Ryan
  • Honerlaw, Jacqueline
  • Davies, Laura
  • Whitbourne, Stacey
  • Cohen, Jeremy
  • Posner, Daniel C
  • Sangar, Rahul
  • Murray, Michael
  • Wang, Xuan
  • Dochtermann, Daniel R
  • Devineni, Poornima
  • Shi, Yunling
  • Nandi, Tarak Nath
  • Assimes, Themistocles L
  • Brunette, Charles A
  • Carroll, Robert J
  • Clifford, Royce
  • Duvall, Scott
  • Gelernter, Joel
  • Hung, Adriana
  • Iyengar, Sudha K
  • Joseph, Jacob
  • Kember, Rachel
  • Kranzler, Henry
  • Kripke, Colleen M
  • Levey, Daniel
  • Luoh, Shiuh-Wen
  • Merritt, Victoria C
  • Overstreet, Cassie
  • Deak, Joseph D
  • Grant, Struan FA
  • Polimanti, Renato
  • Roussos, Panos
  • Shakt, Gabrielle
  • Sun, Yan V
  • Tsao, Noah
  • Venkatesh, Sanan
  • Voloudakis, Georgios
  • Justice, Amy
  • Begoli, Edmon
  • Ramoni, Rachel
  • Tourassi, Georgia
  • Pyarajan, Saiju
  • Tsao, Philip
  • O'Donnell, Christopher J
  • Muralidhar, Sumitra
  • Moser, Jennifer
  • Casas, Juan P
  • Bick, Alexander G
  • Zhou, Wei
  • Cai, Tianxi
  • Voight, Benjamin F
  • Cho, Kelly
  • Gaziano, J Michael
  • Madduri, Ravi K
  • Damrauer, Scott
  • Liao, Katherine P

publication date

  • July 19, 2024