publication venue for
- skDER and CiDDER: two scalable approaches for microbial genome dereplication.. 11:001438. 2025
- Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae.. 10. 2024
- The Canadian VirusSeq Data Portal and Duotang: open resources for SARS-CoV-2 viral sequences and genomic epidemiology.. 10. 2024
- Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections. 10. 2024
- Micromonosporaceae biosynthetic gene cluster diversity highlights the need for broad-spectrum investigations. 10. 2024
- Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC. 9. 2023
- The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information. 9:mgen000908. 2023
- Exploring the mobilome and resistome of Enterococcus faecium in a One Health context across two continents. 8. 2022
- Enabling genomic island prediction and comparison in multiple genomes to investigate bacterial evolution and outbreaks. 8. 2022
- Identifying novel β-lactamase substrate activity through in silico prediction of antimicrobial resistance. 7. 2021
- An assessment of genome annotation coverage across the bacterial tree of life. 6. 2020
- Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. 2:e000080. 2016