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LANDMark: an ensemble approach to the supervised...
Journal article

LANDMark: an ensemble approach to the supervised selection of biomarkers in high-throughput sequencing data

Abstract

BackgroundIdentification of biomarkers, which are measurable characteristics of biological datasets, can be challenging. Although amplicon sequence variants (ASVs) can be considered potential biomarkers, identifying important ASVs in high-throughput sequencing datasets is challenging. Noise, algorithmic failures to account for specific distributional properties, and feature interactions can complicate the discovery of ASV biomarkers. In …

Authors

Rudar J; Porter TM; Wright M; Golding GB; Hajibabaei M

Journal

BMC Bioinformatics, Vol. 23, No. 1,

Publisher

Springer Nature

Publication Date

December 2022

DOI

10.1186/s12859-022-04631-z

ISSN

1471-2105