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Reconstructing influenza incidence by...
Journal article

Reconstructing influenza incidence by deconvolution of daily mortality time series

Abstract

We propose a mathematically straightforward method to infer the incidence curve of an epidemic from a recorded daily death curve and time-to-death distribution; the method is based on the Richardson-Lucy deconvolution scheme from optics. We apply the method to reconstruct the incidence curves for the 1918 influenza epidemic in Philadelphia and New York State. The incidence curves are then used to estimate epidemiological quantities, such as …

Authors

Goldstein E; Dushoff J; Ma J; Plotkin JB; Earn DJD; Lipsitch M

Journal

Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 51, pp. 21825–21829

Publisher

Proceedings of the National Academy of Sciences

Publication Date

December 22, 2009

DOI

10.1073/pnas.0902958106

ISSN

0027-8424