selected scholarly activity
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journal articles
- Late-life shift in caloric intake affects fly metabolism and longevity. Proceedings of the National Academy of Sciences of the United States of America. 120:e2311019120. 2023
- Exploring the dynamics of the 2022 mpox outbreak in Canada. Journal of Medical Virology. 95:e29256. 2023
- Evaluating undercounts in epidemics: Response to Maruotti et al. (2022). Journal of Medical Virology. 95:e28474. 2023
- A wastewater-based epidemic model for SARS-CoV-2 with application to three Canadian cities. Epidemics. 39:100560-100560. 2022
- The need for linked genomic surveillance of SARS-CoV-2. Canada Communicable Disease Report. 48:131-139. 2022
- Bounding the levels of transmissibility & immune evasion of the Omicron variant in South Africa 2021
- Age-dependence of healthcare interventions for COVID-19 in Ontario, Canada. BMC Public Health. 21:706. 2021
- The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic. Current Biology. 31:R918-R929. 2021
- Forward-looking serial intervals correctly link epidemic growth to reproduction numbers. Proceedings of the National Academy of Sciences of the United States of America. 118:e2011548118. 2021
- Age-dependence of healthcare interventions for SARS-CoV-2 infection in Ontario, Canada 2020
- Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak. Journal of the Royal Society Interface. 17:20200144-20200144. 2020
- Traditional Male Circumcision is Associated with Sexual Risk Behaviors in Sub-Saharan Countries Prioritized for Male Circumcision. AIDS and Behavior. 24:951-959. 2020
- Patterns of seasonal and pandemic influenza-associated health care and mortality in Ontario, Canada. BMC Public Health. 19:1237. 2019
- Fitting mechanistic epidemic models to data: A comparison of simple Markov chain Monte Carlo approaches. Statistical Methods in Medical Research. 27:1956-1967. 2018
- Two approaches to forecast Ebola synthetic epidemics. Epidemics. 22:36-42. 2018
- Incorporating periodic variability in hidden Markov models for animal movement. Movement Ecology. 5:1. 2017
- Fitting mechanistic epidemic models to data: a comparison of simple Markov chain Monte Carlo approaches 2017
- Evidence that promotion of male circumcision did not lead to sexual risk compensation in prioritized Sub-Saharan countries. PLoS ONE. 12:e0175928-e0175928. 2017
- La nécessité d’une surveillance génomique liée du SRAS-CoV-2. Canada Communicable Disease Report. 48:147-155.
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preprints
- Reassessing global historical ℛ0estimates of canine rabies 2024
- Immune boosting bridges leaky and polarized vaccination models 2023
- Toward a comprehensive system for constructing compartmental epidemic models 2023
- Evaluating undercounts in epidemics: response to Maruotti et al. 2022 2022
- A Wastewater-Based Epidemic Model for SARS-CoV-2 with Application to Three Canadian Cities 2021
- Age-dependence of healthcare interventions for COVID-19 in Ontario, Canada 2020
- Cohort-based approach to understanding the roles of generation and serial intervals in shaping epidemiological dynamics 2020
- Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak 2020