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In silico analyses identify sequence contamination...
Journal article

In silico analyses identify sequence contamination thresholds for Nanopore-generated SARS-CoV-2 sequences

Abstract

The SARS-CoV-2 pandemic has brought molecular biology and genomic sequencing into the public consciousness and lexicon. With an emphasis on rapid turnaround, genomic data informed both diagnostic and surveillance decisions for the current pandemic at a previously unheard-of scale. The surge in the submission of genomic data to publicly available databases proved essential as comparing different genome sequences offers a wealth of knowledge, …

Authors

Bolaji AJ; Duggan AT

Journal

PLOS Computational Biology, Vol. 20, No. 8,

Publisher

Public Library of Science (PLoS)

DOI

10.1371/journal.pcbi.1011539

ISSN

1553-734X