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AnnoTree: visualization and exploration of a...
Journal article

AnnoTree: visualization and exploration of a functionally annotated microbial tree of life

Abstract

Bacterial genomics has revolutionized our understanding of the microbial tree of life; however, mapping and visualizing the distribution of functional traits across bacteria remains a challenge. Here, we introduce AnnoTree-an interactive, functionally annotated bacterial tree of life that integrates taxonomic, phylogenetic and functional annotation data from over 27 000 bacterial and 1500 archaeal genomes. AnnoTree enables visualization of …

Authors

Mendler K; Chen H; Parks DH; Lobb B; Hug LA; Doxey AC

Journal

Nucleic Acids Research, Vol. 47, No. 9, pp. 4442–4448

Publisher

Oxford University Press (OUP)

Publication Date

May 21, 2019

DOI

10.1093/nar/gkz246

ISSN

0305-1048