selected scholarly activity
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chapters
- Poster Summaries. Current plant science and biotechnology in agriculture. 225-250. 2005
- Enhancement of Bioremediation and Phytoremediation Using Electrokinetics
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journal articles
- Nitrogen Journey in Plants: From Uptake to Metabolism, Stress Response, and Microbe Interaction. Biomolecules. 13:1443-1443. 2023
- Deciphering the role of SPL12 and AGL6 from a genetic module that functions in nodulation and root regeneration in Medicago sativa. Plant Molecular Biology. 110:511-529. 2022
- SPL12 Regulates AGL6 and AGL21 to Modulate Nodulation and Root Regeneration under Osmotic Stress and Nitrate Sufficiency Conditions in Medicago sativa. Plants. 11:3071-3071. 2022
- Evaluating the biocontrol potential of Canadian strain Bacillus velezensis 1B-23 via its surfactin production at various pHs and temperatures. BMC Biotechnology. 21:31. 2021
- Whole genome analysis of Gluconacetobacter azotocaptans DS1 and its beneficial effects on plant growth. 3 Biotech. 11:450. 2021
- Characterization and genomic analysis of a diesel-degrading bacterium, Acinetobacter calcoaceticus CA16, isolated from Canadian soil. BMC Biotechnology. 20:39. 2020
- Surfactin-producing Bacillus velezensis 1B-23 and Bacillus sp. 1D-12 protect tomato against bacterial canker caused by Clavibacter michiganensis subsp. michiganensis. Journal of Plant Pathology. 102:451-458. 2020
- Isolation and characterization of Burkholderia cenocepacia CR318, a phosphate solubilizing bacterium promoting corn growth. Microbiological Research. 233:126395-126395. 2020
- Characterization and complete genome analysis of the surfactin-producing, plant-protecting bacterium Bacillus velezensis 9D-6. BMC Microbiology. 19:5. 2019
- Isolation and characterization of novel bacterial strains for integrated solar-bioelectrokinetic of soil contaminated with heavy petroleum hydrocarbons. Chemosphere. 237:124514-124514. 2019
- RNA polymerase II-independent recruitment of SPT6L at transcription start sites in Arabidopsis. Nucleic Acids Research (NAR). 47:6714-6725. 2019
- Mitigation of soil contaminated with diesel fuel using bioelectrokinetics. Environmental Science and Engineering. 54:416-426. 2019
- Comparative transcriptomic analysis reveals different responses of Arabidopsis thaliana roots and shoots to infection by Agrobacterium tumefaciens in a hydroponic co-cultivation system. Physiological and Molecular Plant Pathology. 106:109-119. 2019
- Bacteria in Cancer Therapeutics: A Framework for Effective Therapeutic Bacterial Screening and Identification. Journal of Cancer. 10:1781-1793. 2019
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Genome‐wide occupancy of histone H3K27 methyltransferases
CURLY LEAF andSWINGER in Arabidopsis seedlings. Plant Direct. 3:e00100. 2019 - Clavibacter michiganensis ssp. michiganensis: bacterial canker of tomato, molecular interactions and disease management. Molecular Plant Pathology. 19:2036-2050. 2018
- Cytosolic acetyl-CoA promotes histone acetylation predominantly at H3K27 in Arabidopsis. Nature Plants. 3:814-824. 2017
- Erratum for Ho et al., “Complete Genome Sequence of Acinetobacter calcoaceticus CA16, a Bacterium Capable of Degrading Diesel and Lignin”. Microbiology Resource Announcements. 5:e00808-e00817. 2017
- MsmiR156 affects global gene expression and promotes root regenerative capacity and nitrogen fixation activity in alfalfa. Transgenic Research. 26:541-557. 2017
- A Hydroponic Co-cultivation System for Simultaneous and Systematic Analysis of Plant/Microbe Molecular Interactions and Signaling. Journal of Visualized Experiments. 2017. 2017
- Complete Genome Sequence of Acinetobacter calcoaceticus CA16, a Bacterium Capable of Degrading Diesel and Lignin. Microbiology Resource Announcements. 5:e00494-e00417. 2017
- Complete Genome Sequence of Burkholderia cenocepacia CR318, a Phosphate-Solubilizing Bacterium Isolated from Corn Root. Microbiology Resource Announcements. 5:e00490-e00417. 2017
- Solar power enhancement of electrokinetic bioremediation of phenanthrene byMycobacterium pallens. Bioremediation Journal. 21:53-70. 2017
- Current knowledge and perspectives of Paenibacillus: a review. Microbial Cell Factories. 15:203. 2016
- Isolation, identification and characterization of Paenibacillus polymyxa CR1 with potentials for biopesticide, biofertilization, biomass degradation and biofuel production. BMC Microbiology. 16:244. 2016
- Complete Genome Sequence of Arthrobacter sp. Strain LS16, Isolated from Agricultural Soils with Potential for Applications in Bioremediation and Bioproducts. Microbiology Resource Announcements. 4:e01586-e01515. 2016
- A Review Article: Electrokinetic Bioremediation Current Knowledge and New Prospects. Advances in Microbiology. 06:57-72. 2016
- Sorption of phenanthrene by kaolin and efficacy of hydraulic versus electroosmotic flow to stimulate desorption. Journal of Environmental Chemical Engineering. 3:2301-2310. 2015
- Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness. BMC Genomics. 15:851. 2014
- Complete Genome Sequence of Paenibacillus polymyxa CR1, a Plant Growth-Promoting Bacterium Isolated from the Corn Rhizosphere Exhibiting Potential for Biocontrol, Biomass Degradation, and Biofuel Production. Microbiology Resource Announcements. 2:e01218-e01213. 2014
- Agrobacterium tumefaciens responses to plant-derived signaling molecules. Frontiers in Plant Science. 5:322. 2014
- Complete genome sequence of Paenibacillus polymyxa CR1, a plant growth-promoting bacterium isolated from the corn rhizosphere exhibiting potential for biocontrol, biomass degradation, and biofuel production. Microbiology Resource Announcements. 2. 2014
- Development and validation of an rDNA operon based primer walking strategy applicable to de novo bacterial genome finishing. Frontiers in Microbiology. 5:769. 2014
- A Really Useful Pathogen, Agrobacterium tumefaciens. The Plant Cell. 24:tpc.112.tt1012. 2012
- Comparative transcriptome analysis ofAgrobacterium tumefaciensin response to plant signal salicylic acid, indole-3-acetic acid and γ-amino butyric acid reveals signalling cross-talk andAgrobacterium-plant co-evolution. Cellular Microbiology. 10:2339-2354. 2008
- Transcriptome Profiling and Functional Analysis ofAgrobacterium tumefaciensReveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved inAgrobacterium-Plant Interactions. Journal of Bacteriology. 190:494-507. 2008
- The plant signal salicylic acid shuts down expression of the vir regulon and activates quormone-quenching genes in Agrobacterium. Proceedings of the National Academy of Sciences of the United States of America. 104:11790-11795. 2007
- Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria. Nucleic Acids Research (NAR). 34:2686-2697. 2006
- Regulation and Properties of PstSCAB, a High-Affinity, High-Velocity Phosphate Transport System ofSinorhizobium meliloti. Journal of Bacteriology. 188:1089-1102. 2006
- Phosphate limitation induces catalase expression inSinorhizobium meliloti,Pseudomonas aeruginosaandAgrobacterium tumefaciens. Molecular Microbiology. 58:877-894. 2005
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preprints