Meta-analysis of genome-wide associations and polygenic risk prediction for atrial fibrillation in more than 180,000 cases. Journal Articles uri icon

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abstract

  • Atrial fibrillation (AF) is the most common heart rhythm abnormality and is a leading cause of heart failure and stroke. This large-scale meta-analysis of genome-wide association studies increased the power to detect single-nucleotide variant associations and found more than 350 AF-associated genetic loci. We identified candidate genes related to muscle contractility, cardiac muscle development and cell-cell communication at 139 loci. Furthermore, we assayed chromatin accessibility using assay for transposase-accessible chromatin with sequencing and histone H3 lysine 4 trimethylation in stem cell-derived atrial cardiomyocytes. We observed a marked increase in chromatin accessibility for our sentinel variants and prioritized genes in atrial cardiomyocytes. Finally, a polygenic risk score (PRS) based on our updated effect estimates improved AF risk prediction compared to the CHARGE-AF clinical risk score and a previously reported PRS for AF. The doubling of known risk loci will facilitate a greater understanding of the pathways underlying AF.

authors

  • Roselli, Carolina
  • Surakka, Ida
  • Olesen, Morten S
  • Sveinbjornsson, Gardar
  • Marston, Nicholas A
  • Choi, Seung Hoan
  • Holm, Hilma
  • Chaffin, Mark
  • Gudbjartsson, Daniel
  • Hill, Matthew C
  • Aegisdottir, Hildur
  • Albert, Christine M
  • Alonso, Alvaro
  • Anderson, Christopher D
  • Arking, Dan E
  • Arnar, David O
  • Barnard, John
  • Benjamin, Emelia J
  • Braunwald, Eugene
  • Brumpton, Ben
  • Campbell, Archie
  • Chami, Nathalie
  • Chasman, Daniel I
  • Cho, Kelly
  • Choi, Eue-Keun
  • Christophersen, Ingrid E
  • Chung, Mina K
  • Conen, David
  • Crijns, Harry J
  • Cutler, Michael J
  • Czuba, Tomasz
  • Damrauer, Scott M
  • Dichgans, Martin
  • Dörr, Marcus
  • Dudink, Elton
  • Duong, ThuyVy
  • Erikstrup, Christian
  • Esko, Tõnu
  • Fatkin, Diane
  • Faul, Jessica D
  • Ferreira, Manuel
  • Freitag, Daniel F
  • Ganesh, Santhi K
  • Gaziano, J Michael
  • Geelhoed, Bastiaan
  • Ghouse, Jonas
  • Gieger, Christian
  • Giulianini, Franco
  • Graham, Sarah E
  • Gudnason, Vilmundur
  • Guo, Xiuqing
  • Haggerty, Christopher
  • Hayward, Caroline
  • Heckbert, Susan R
  • Hveem, Kristian
  • Ito, Kaoru
  • Johnson, Renee
  • Jukema, J Wouter
  • Jurgens, Sean J
  • Kääb, Stefan
  • Kane, John P
  • Kany, Shinwan
  • Kardia, Sharon LR
  • Kavousi, Maryam
  • Khurshid, Shaan
  • Kamanu, Frederick K
  • Kirchhof, Paulus
  • Kleber, Marcus E
  • Knight, Stacey
  • Komuro, Issei
  • Krieger, Jose E
  • Launer, Lenore J
  • Li, Dadong
  • Lin, Honghuang
  • Lin, Henry J
  • Loos, Ruth JF
  • Lotta, Luca
  • Lubitz, Steven A
  • Lunetta, Kathryn L
  • Macfarlane, Peter W
  • Magnusson, Patrik KE
  • Malik, Rainer
  • Mantineo, Helene
  • Marcus, Gregory M
  • März, Winfried
  • McManus, David D
  • Melander, Olle
  • Melloni, Giorgio EM
  • Meyre, Pascal B
  • Miyazawa, Kazuo
  • Mohanty, Sanghamitra
  • Monfort, Laia M
  • Müller-Nurasyid, Martina
  • Nafissi, Navid A
  • Natale, Andrea
  • Nazarian, Saman
  • Ostrowski, Sisse R
  • Pak, Hui-Nam
  • Pang, Shichao
  • Pedersen, Ole B
  • Pedersen, Nancy L
  • Pereira, Alexandre C
  • Pirruccello, James P
  • Preuss, Michael
  • Psaty, Bruce M
  • Pullinger, Clive R
  • Rader, Daniel J
  • Rämö, Joel T
  • Ridker, Paul M
  • Rienstra, Michiel
  • Risch, Lorenz
  • Roden, Dan M
  • Rotter, Jerome I
  • Sabatine, Marc S
  • Schunkert, Heribert
  • Shah, Svati H
  • Shim, Jaemin
  • Shoemaker, M Benjamin
  • Simonson, Bridget
  • Sinner, Moritz F
  • Smit, Roelof AJ
  • Smith, Jennifer A
  • Smith, Nicholas L
  • Smith, J Gustav
  • Soliman, Elsayed Z
  • Sørensen, Erik
  • Sotoodehnia, Nona
  • Strbian, Daniel
  • Stricker, Bruno H
  • Teder-Laving, Maris
  • Sun, Yan V
  • Thériault, Sébastien
  • Thorolfsdottir, Rosa B
  • Thorsteinsdottir, Unnur
  • Tveit, Arnljot
  • van der Harst, Pim
  • van Meurs, Joyce
  • Wang, Biqi
  • Weiss, Stefan
  • Wells, Quinn S
  • Weng, Lu-Chen
  • Wilson, Peter W
  • Xiao, Ling
  • Yang, Pil-Sung
  • Yao, Jie
  • Yoneda, Zachary T
  • Zeller, Tanja
  • Zeng, Lingyao
  • Zhao, Wei
  • Zhou, Xiang
  • Zöllner, Sebastian
  • BioBank Japan Project
  • Regeneron Genetics Center
  • DBDS Genomic Consortium
  • Ruff, Christian T
  • Bundgaard, Henning
  • Willer, Cristen
  • Stefansson, Kari
  • Ellinor, Patrick T

publication date

  • March 2025