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What should the genome-wide significance threshold...
Journal article

What should the genome-wide significance threshold be? Empirical replication of borderline genetic associations

Abstract

BACKGROUND: Robust replication is a sine qua non for the rigorous documentation of proposed associations in the genome-wide association (GWA) setting. Currently, associations of common variants reaching P ≤ 5 × 10(-8) are considered replicated. However, there is some ambiguity about the most suitable threshold for claiming genome-wide significance. METHODS: We defined as 'borderline' associations those with P > 5 × 10(-8) and P ≤ 1 × 10(-7). …

Authors

Panagiotou OA; Ioannidis JPA; Project FTG-WS

Journal

International Journal of Epidemiology, Vol. 41, No. 1, pp. 273–286

Publisher

Oxford University Press (OUP)

Publication Date

February 2012

DOI

10.1093/ije/dyr178

ISSN

0300-5771