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Exploration of the Four-Dimensional-Conformational...
Journal article

Exploration of the Four-Dimensional-Conformational Potential Energy Hypersurface of N-Acetyl-l-aspartic Acid N‘-Methylamide with Its Internally Hydrogen Bonded Side-Chain Orientation

Abstract

Side-chain conformational potential energy hypersurfaces have been generated and analyzed for each of the nine possible backbone conformers of N-acetyl-l-aspartic acid-N‘ methylamide. A total of 37 out of the 81 possible conformers were found and optimized at the B3LYP/6-31G(d) level of theory. The relative energies as well as the stabilization exerted by the side-chain on the backbone have been calculated, at this level of theory, for the 37 optimized conformers. Various backbone-backbone (N−H···OC) and backbone-side-chain (N−H···OC; N−H···OH) hydrogen bonds were analyzed. The appearance of the notoriously absent αL backbone conformer was attributed to such a backbone-side-chain (BB−SC) hydrogen bonds as well as a very unusual backbone-backbone (BB−BB) hydrogen bond.

Authors

Koo JCP; Chass GA; Perczel A; Farkas Ö; Torday LL; Varro A; Papp JG; Csizmadia IG

Journal

The Journal of Physical Chemistry A, Vol. 106, No. 30, pp. 6999–7009

Publisher

American Chemical Society (ACS)

Publication Date

August 1, 2002

DOI

10.1021/jp014514b

ISSN

1089-5639

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