selected scholarly activity
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academic article
- Computing Maximal Covers for Protein Sequences. Journal of Computational Biology. 30:149-160. 2023
- Computation of the suffix array, Burrows-Wheeler transform and FM-index in V-order. Theoretical Computer Science. 880:82-96. 2021
- Longest previous overlapping factor array. Information Processing Letters. 168:106097-106097. 2021
- A Formal Approach to Network Segmentation. Computers and Security. 103:102162-102162. 2021
- A new approach to regular & indeterminate strings. Theoretical Computer Science. 854:105-115. 2021
- A formal framework for Stringology. Discrete Applied Mathematics. 274:141-151. 2020
- String covering with optimal covers. Journal of Discrete Algorithms. 51:26-38. 2018
- String shuffle: Circuits and graphs. Journal of Discrete Algorithms. 31:120-128. 2015
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conference paper
- An Overview of String Processing Applications to Data Analytics. 2021 Reconciling Data Analytics, Automation, Privacy, and Security: A Big Data Challenge (RDAAPS). 1-8. 2021
- Applications of V-Order: Suffix Arrays, the Burrows-Wheeler Transform & the FM-index. Lecture Notes in Computer Science. 329-338. 2019
- Frequency Covers for Strings. Fundamenta Informaticae. 275-289. 2018
- A faster v-order string comparison algorithm. Proceedings of the Prague Stringology Conference, PSC 2018. 38-49. 2018
- Forced Repetitions over Alphabet Lists. PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2016. 125-134. 2016
- A Formal Framework for Stringology. PROCEEDINGS OF THE PRAGUE STRINGOLOGY CONFERENCE 2015. 90-103. 2015
- Non-repetitive Strings over Alphabet Lists. Lecture Notes in Computer Science. 270-281. 2015
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thesis