selected scholarly activity
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chapters
- Modeling Candida auris Colonization on Porcine Skin Ex Vivo. Methods in molecular biology (Clifton, N.J.). 251-258. 2022
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conferences
- The Effect Of Anatomic Location On Pig Models Of Burn Injury And Wound Healing. Wound Repair and Regeneration. 258-258. 2023
- Culturing of Bacterial Isolates from Skin of Pediatric Atopic Dermatitis Subjects. Journal of Allergy and Clinical Immunology. AB131-AB131. 2022
- Characterizing Host-Microbiome Interactions In Response To Sharp Debridement In Diabetic Foot Ulcers. Wound Repair and Regeneration. A18-A19. 2021
- Effects Of Chlorhexidine Gluconate On The Skin Microbiome With An Ex-vivo Skin Model. Wound Repair and Regeneration. A49-A49. 2021
- Trade-offs Between Antiseptic Efficacy And Cytotoxicity In A Human Ex Vivo Wound Contamination Model. Wound Repair and Regeneration. A23-A23. 2021
- Staphylococcus aureus virulence acquisition and diabetic wound fate. Wound Repair and Regeneration. S54-S54. 2020
- Investigating bacterial-fungal interactions within chronic wound microbiomes. Wound Repair and Regeneration. S16-S17. 2020
- Human Macrophage Response to Pathogens Isolated From Diabetic Foot Ulcers. Tissue Engineering - Part A. S156-S156. 2017
- Human Macrophage Response to Bacterial and Fungal Isolates from Diabetic Foot Ulcers. Wound Repair and Regeneration. A12-A12.
- MONITORING OF BIOFILM FORMATION IN BURN WOUNDS IN REAL-TIME. Wound Repair and Regeneration. A28-A28.
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journal articles
- Early-life Upper Airway Microbiota are Associated with Decreased Lower Respiratory Tract Infections.. Journal of Allergy and Clinical Immunology. S0091-6749(24)01189-8. 2024
- Upper respiratory microbial communities of healthy populations are shaped by niche and age.. Microbiome. 12:206. 2024
- Farm exposure is associated with human breast milk immune profile and microbiome.. bioRxiv. 5:2024.10.14.618271. 2024
- Combined metagenomic- and culture-based approaches to investigate bacterial strain–level associations with medication-controlled mild-moderate atopic dermatitis. J Allergy Clin Immunol Glob. 3:100259-100259. 2024
- The porcine skin microbiome exhibits broad fungal antagonism. Fungal Genetics and Biology. 173:103898-103898. 2024
- Key aspects of papillomavirus infection influence the host cervicovaginal microbiome in a preclinical murine papillomavirus (MmuPV1) infection model. mBio. 15:e0093324. 2024
- Skin-associated Corynebacterium amycolatum shares cobamides. bioRxiv. 5:2024.04.28.591522. 2024
- Micromonosporaceae biosynthetic gene cluster diversity highlights the need for broad-spectrum investigations. Microbial Genomics. 10. 2024
- The effect of anatomic location on porcine models of burn injury and wound healing. Wound Repair and Regeneration. 32:675-685. 2024
- What is slough? Defining the proteomic and microbial composition of slough and its implications for wound healing. Wound Repair and Regeneration. 32:783-798. 2024
- Next Steps: Studying Diabetic Foot Infections with Next-Generation Molecular Assays. Current Infectious Disease Reports. 25:323-330. 2023
- skDER: microbial genome dereplication approaches for comparative and metagenomic applications. bioRxiv. 4:2023.09.27.559801. 2023
- Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC. Microbial Genomics. 9. 2023
- The dynamic balance of the skin microbiome across the lifespan. Biochemical Society Transactions. 51:71-86. 2023
- Comparative Genomic and Metagenomic Investigations of the Corynebacterium tuberculostearicum Species Complex Reveals Potential Mechanisms Underlying Associations To Skin Health and Disease. Microbiology spectrum. 11:e0357822. 2023
- Sweat and Sebum Preferences of the Human Skin Microbiota. Microbiology spectrum. 11:e0418022. 2023
- Mild-moderate atopic dermatitis controlled by medication exhibits similar bacterial taxa to controls, but strain-level effects and virome disruption persist. Journal of Allergy and Clinical Immunology. 151:AB231-AB231. 2023
- Forgotten fungi: the importance of the skin mycobiome. Current Opinion in Microbiology. 70:102235-102235. 2022
- IWII Wound Infection in Clinical Practice consensus document: 2022 update. Journal of Wound Care. 31:S10-S21. 2022
- Cobamide Sharing Is Predicted in the Human Skin Microbiome. mSystems. 7:e0067722. 2022
- Robbing Peter to Pay Paul: Chlorhexidine gluconate demonstrates short‐term efficacy and long‐term cytotoxicity. Wound Repair and Regeneration. 30:573-584. 2022
- vRhyme enables binning of viral genomes from metagenomes. Nucleic Acids Research (NAR). 50:e83-e83. 2022
- Two-for-one: Dual host-microbe functions of S. epidermidis Sph. Cell Host and Microbe. 30:279-280. 2022
- Staphylococcus aureus Disruption of Keratinocytes in Atopic Dermatitis. Journal of Allergy and Clinical Immunology. 149:AB230-AB230. 2022
- Ankle brachial indices and anaerobes: is peripheral arterial disease associated with anaerobic bacteria in diabetic foot ulcers?. Therapeutic Advances in Endocrinology and Metabolism. 13:204201882211187-204201882211187. 2022
- Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms. The ISME Journal. 15:2012-2027. 2021
- 197 Investigation of vitamin B12 sharing within the skin microbiome. Journal of Investigative Dermatology. 141:S35-S35. 2021
- Living in Your Skin: Microbes, Molecules, and Mechanisms. Infection and Immunity. 89:e00695-e00620. 2021
- The otic microbiota and mycobiota in a referral population of dogs in eastern USA with otitis externa. Veterinary Dermatology. 31:225-225. 2020
- Candida auris Forms High-Burden Biofilms in Skin Niche Conditions and on Porcine Skin.. Clinical and Vaccine Immunology. 5:e00910-e00919. 2020
- Human macrophage response to microbial supernatants from diabetic foot ulcers. Wound Repair and Regeneration. 27:598-608. 2019
- 540. The Impact of Diet and Oral Hygiene on the Risk of Multidrug-Resistant Organism Carriage in the Mouth and Gut. Open Forum Infectious Diseases. 6:S258-S258. 2019
- 940 Epithelial-microbial crosstalk modifies wound healing outcomes: from shotgun metagenomics to mechanistic understanding. Journal of Investigative Dermatology. 139:S162-S162. 2019
- Strain- and Species-Level Variation in the Microbiome of Diabetic Wounds Is Associated with Clinical Outcomes and Therapeutic Efficacy. Cell Host and Microbe. 25:641-655.e5. 2019
- The role of the microbiome in nonhealing diabetic wounds. Annals of the New York Academy of Sciences. 1435:79-92. 2019
- Fungi in the Wound Microbiome. Advances in Wound Care. 7:247-255. 2018
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A scientist's perspective on Ag
7 NO11 . Wound Management and Prevention. 64:10-11. 2018 - Silver oxynitrate – an efficacious compound for the prevention and eradication of dual-species biofilms. Biofouling. 33:460-469. 2017
- Targeting biofilms of multidrug-resistant bacteria with silver oxynitrate. International Journal of Antimicrobial Agents. 49:719-726. 2017
- Unravelling the myths and mysteries of the antimicrobial agent, silver. The FASEB Journal. 31. 2017
- Measuring the microbiome of chronic wounds with use of a topical antimicrobial dressing – A feasibility study. PLoS ONE. 12:e0187728-e0187728. 2017
- Temporal Stability in Chronic Wound Microbiota Is Associated With Poor Healing. Journal of Investigative Dermatology. 137:237-244. 2017
- Reply to “Understanding the Role of Fungi in Chronic Wounds”. mBio. 7:e02033-e02016. 2016
- Redefining the Chronic-Wound Microbiome: Fungal Communities Are Prevalent, Dynamic, and Associated with Delayed Healing. mBio. 7:e01058-e01016. 2016
- Biosynthesis of the Fluorinated Natural Product Nucleocidin in Streptomyces calvus Is Dependent on the bldA‐Specified Leu‐tRNAUUA Molecule. ChemBioChem. 16:2498-2506. 2015
- Silver Oxynitrate, an Unexplored Silver Compound with Antimicrobial and Antibiofilm Activity. Antimicrobial Agents and Chemotherapy. 59:4031-4039. 2015
- Alternative Pathway to a Glycopeptide-Resistant Cell Wall in the Balhimycin Producer Amycolatopsis balhimycina. ACS Infectious Diseases. 1:243-252. 2015
- Vancomycin-Variable Enterococci Can Give Rise to Constitutive Resistance during Antibiotic Therapy. Antimicrobial Agents and Chemotherapy. 59:1405-1410. 2015
- Harnessing the Synthetic Capabilities of Glycopeptide Antibiotic Tailoring Enzymes: Characterization of the UK‐68,597 Biosynthetic Cluster. ChemBioChem. 15:2613-2623. 2014
- Outbreak of Vancomycin-Susceptible Enterococcus faecium Containing the Wild-Type vanA Gene. Journal of Clinical Microbiology. 52:1682-1686. 2014
- A Cryptic Polyene Biosynthetic Gene Cluster in Streptomyces calvus Is Expressed upon Complementation with a Functional bldA Gene. Cell Chemical Biology. 20:1214-1224. 2013
- The Comprehensive Antibiotic Resistance Database. Antimicrobial Agents and Chemotherapy. 57:3348-3357. 2013
- Glycopeptide Sulfation Evades Resistance. Journal of Bacteriology. 195:167-171. 2013
- Sulfonation of glycopeptide antibiotics by sulfotransferase StaL depends on conformational flexibility of aglycone scaffold. Proceedings of the National Academy of Sciences of the United States of America. 109:11824-11829. 2012
- Antibiotic resistance is ancient. Nature. 477:457-461. 2011
- Antibiotic adjuvants: multicomponent anti-infective strategies. Expert Reviews in Molecular Medicine. 13:e5. 2011
- Noncanonical Vancomycin Resistance Cluster from Desulfitobacterium hafniense Y51. Antimicrobial Agents and Chemotherapy. 53:2841-2845. 2009
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preprints
- Large-scale investigation for antimicrobial activity reveals novel defensive species across the healthy skin microbiome. 2024
- Altered oral microbiota of drug-resistant organism carriers exhibit impaired gram-negative pathogen inhibition. 2024
- Still Not Sterile: Chlorhexidine gluconate treatment does not completely reduce skin microbial bioburden and promotes pathogen overabundance in patients undergoing elective surgeries 2024
- Upper respiratory microbial communities of healthy populations are shaped by niche and age 2024
- The Porcine Skin Microbiome Exhibits Broad Fungal Antagonism 2024
- What is Slough? A pilot study to define the proteomic and microbial composition of wound slough and its implications for wound healing 2023
- zol & fai: large-scale targeted detection and evolutionary investigation of gene clusters 2023
- Combined metagenomic- and culture-based approaches to investigate bacterial strain-level associations with medication-controlled mild-moderate atopic dermatitis 2023
- Comparative genomic and metagenomic investigations of the Corynebacterium tuberculostearicum species complex reveals potential mechanisms underlying associations to skin health and disease 2022
- Sweat and sebum preferences of the human skin microbiota 2022
- Evolutionary investigations of the biosynthetic diversity in the skin microbiome usinglsaBGC 2022
- vRhyme enables binning of viral genomes from metagenomes 2021
- Trade-offs between antiseptic cytotoxicity and efficacy in a humanex vivowound contamination model 2021
- Cobamide sharing drives skin microbiome dynamics 2020
- Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms 2020
- Effects of Topical Antimicrobial Formulations on Pseudomonas aeruginosa Biofilm in an In vivo Porcine Burn Wound Model 2019
- The microbial basis of impaired wound healing: differential roles for pathogens, “bystanders”, and strain-level diversification in clinical outcomes 2018